| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0460 |
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| Symbol | |
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| ID | 5705457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 528644 |
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| End bp | 530146 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641269985 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001535380 |
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| Protein GI | 159036127 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000172466 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGACG AAGATGGGTT GCCCGTGCGC GGGCTGCCGG CCGAGCGGGT CCTCGAGGAA
GTCCGGGCGC TGCGCGCCGG GGACCGGCCG ACCCACGGCG GTCGACTGTT CGCGTTGGTG
TTCGATCCGG CAGTGCCCGG GCTGGACGCG CTGACCGCCT CCGCGCACGC GGAGAGCGCG
CACGTCAACG GGCTTGACCC GACCGCCTTC CCGTCCCTGG TCGCCATGGA GAACGCGCTG
GTCGGTGCCG CTGCCCGCCT GCTCGGTGGC GGGCCCGGCA CCGATGCACC GGAGGTGGTC
GGCGCGGTCA CCAGCGGGGG CACCGAGTCG CTGATCCTGG CGGTGAAGAC GGCCCGTGAC
GCCCATCCCG AGATCGCCGA ACCCCGGATC GTGGTGCCGG CCACCGCGCA CGCCGCGTTC
GCCAAGGCTG GCCACTACCT GCGGGTGGCC GTCGACATGG TGCCGGTGTC GGCGGAGACC
CTGCGCCCCG ATCCGGCCGC CGTCGCCGCC GCGATCCGCC CGGAAACCGT GCTGGTCGGG
GCCTCAGCCC CGGGATACGC ACACGGCGTC ATCGACCCCG TCGCCGAGAT CGCGGCGGTC
GCCGCCGATG CCGGGGTGCG CTGCCACGTG GACGCGTGCT TCGGCGGATG GACCCTGCCC
TGGCTGCGTC GCCTCGGTGA ACCGGTGCCG GCGTTCGACT TCGCCCTACC CGGTGTCACC
TCGATCTCGG TGGACCTGCA CAAGTACGCG TACGCCCCGA AGGGCGTGTC GATCCTGCTG
CACCGTGACC CGGAGCTGCG GAAGCCGCAG TACTTCGCGC ACGCCGACTG GCCCGGCTAC
ACAATGATCA ATCCGGTGAT CGCCTCCACC CGTTCCGGTG GACCCATCGC CGCCGCGTAC
GCGACCCTTC GGCACCTGGG CGAGGACGGG TACCTACGGC TGGCGGCGGC GACCCGGGAC
GCGGTGAACG GGCTGGCCGA CGCCGTCCGG GCCACTCCCG GGCTGCGGTT GCTGGCCGAA
CCCGAGTCGA CCGTGATCTG TGTTGCCGCG ACCGACCCGG AGCTGGATCT GTTCGTGCTC
GTGGACGAGT TGGACGCGCG CGGCTGGCAC ACCCAACCGC AGCTCGCCTA CGCCGGCCTG
CCCCGTAACG TGCACCTGTC GGTGACCGCG TCGGTGGCGC CGCTGGTAGC CGGCTTCGGC
GCCGACCTGG CCGACGCCGT TGCGGCGACC CGGGCGGCCG GGCCGGTCCG ACTTCCCGTG
GAACTGCTCG CGCTCGCCCG GTCCCTGACC CCGGAAGGGC TGACCCCGGA CCGGGTCGCC
GGCCTGACCG CCGGTCTCGG CGTCGGATCG GGCGACGCGG CGGACGACGC TTCCCCCGCC
CTGGTGCCGT CCCGGATGGC CGTGGTGAAC ACTCTGCTCG AAGCGGCGCC AGCGGCGCTG
CGGGAGCGCC TGCTGGTGGA GTTCGTCGGG CTGATGCAGC GTCCCACCTG GTCGCGACAT
TGA
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| Protein sequence | MIDEDGLPVR GLPAERVLEE VRALRAGDRP THGGRLFALV FDPAVPGLDA LTASAHAESA
HVNGLDPTAF PSLVAMENAL VGAAARLLGG GPGTDAPEVV GAVTSGGTES LILAVKTARD
AHPEIAEPRI VVPATAHAAF AKAGHYLRVA VDMVPVSAET LRPDPAAVAA AIRPETVLVG
ASAPGYAHGV IDPVAEIAAV AADAGVRCHV DACFGGWTLP WLRRLGEPVP AFDFALPGVT
SISVDLHKYA YAPKGVSILL HRDPELRKPQ YFAHADWPGY TMINPVIAST RSGGPIAAAY
ATLRHLGEDG YLRLAAATRD AVNGLADAVR ATPGLRLLAE PESTVICVAA TDPELDLFVL
VDELDARGWH TQPQLAYAGL PRNVHLSVTA SVAPLVAGFG ADLADAVAAT RAAGPVRLPV
ELLALARSLT PEGLTPDRVA GLTAGLGVGS GDAADDASPA LVPSRMAVVN TLLEAAPAAL
RERLLVEFVG LMQRPTWSRH
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