Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0443 |
Symbol | |
ID | 5705313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 508433 |
End bp | 509101 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269968 |
Product | TrkA domain-containing protein |
Protein accession | YP_001535363 |
Protein GI | 159036110 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000103493 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTCGGCTA GGAGAAACCC GCACAGCGGA GTCATCGTCG TGGGACTCGG ACGCTTCGGC TCCCACGTCG CCGACACGCT CGTGCACCTC GAGCACGAGG TACTGGCCAT CGACCACGAC GCGGAGCGGG TACAGCGGTG GGCCAACCGG ATCGACCGGG TGGTGCAGGC CGACGCTACC GAGGAGGGCG CGCTGAGCCA GCTCGGCGCG GCAGACCTCG AACGAGCCGT GGTGGCCATT GGCGCCTCGA TGGAGGCGAG CGTACTGTCC GTCCTCGCCC TCGTAGAACT GGGCATACCG CAGATCTGGG CCCGAGCCAC TTCGGCGGAG CATGCCAAGA TCCTCGCCTC GGTCGGGGCG CACCACGTGA TCTTCCCCGA GGCGGAGACC GGCGAACGGC TGGCCCACCT GATCGTCAGC CGGATGCTGG ACTTCATCGA GTTCGGTGAT GACTTCGCGA TCGCCAAGGT CCGCACCCCG GAGAGCCTCA CCGGCCGTCC CCTCGCCGAG CTGGCCCCGG AGGACCGCCA TGGGGTACGG GTGGTGGGAG TAAAACTGGC CGGCGAACGG TTCCAAGCTG CCACCGACGA CTCGGTGCTG ACCCCGGGGA GCATGCTGAT CGTGGAGGGC AGCATCGAAC AGGTGCAGTT GTTCGCCGCG CTCACCTGA
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Protein sequence | MSARRNPHSG VIVVGLGRFG SHVADTLVHL EHEVLAIDHD AERVQRWANR IDRVVQADAT EEGALSQLGA ADLERAVVAI GASMEASVLS VLALVELGIP QIWARATSAE HAKILASVGA HHVIFPEAET GERLAHLIVS RMLDFIEFGD DFAIAKVRTP ESLTGRPLAE LAPEDRHGVR VVGVKLAGER FQAATDDSVL TPGSMLIVEG SIEQVQLFAA LT
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