| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0434 |
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| Symbol | |
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| ID | 5707855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 497794 |
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| End bp | 500517 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641269959 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001535354 |
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| Protein GI | 159036101 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain)
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.253283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000288682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCCAC GGATCCACCT CCCGACCGGG TGGGTGACCT TCGTCTTCAC CGACATCGAG
GGCTCGACCC GGCTGGCCCA ACTGCTCGGG CCGGACTACC GGCCGCTGCT GCGCGAACAC
CGGCGCCTGC TGCGCCGGAC GGTCGCCGCG ACCGAGGGGG CGGAGTTGCT CACCGAGGGC
GACTCGTTCT TCCTGGCCTT CGCGGACGCG TCCGCCGCGC TGACCGCCTG CCTGACCGCC
CAACGCGCTT TGATCAGCCA TGATTGGCCG ACACCCGACG CCACCCCGCG GGTGCGGATG
GGACTGCACA CCGGGTGGGC GGAGCCCCGC GACGGCGAAT ACGCGAGCCC GGAGGTGCAC
CGGGCCGCCC GGATCGCCGC CGCCGCGCAC GGTGGACAGG TGCTCTGCTC CGCCGCGACC
GTCCACCACG CCGACCCGAT GCCCGGCGGT GCCTCGCTGC TCGACCTGGG CCTGTACCGG
CTGCGCGGCT TCGACGACCG GGAGCGGCTC TTCCAGCTGA TCGCGCCCGG CCTGGAGCGG
CAGTTCCCGC GCCCGCGTAC CGCCGAAGCG GCGGCGCACA ACCTGCCCAC CCAGGTCAGC
TCGTTCGTCG GCCGGCAGGC CGAGTGGGCT GAGCTGCGCC GGCTGGTGGA GAGCTCCCGA
CTGGTCACGG TGCTCGGTGC GGGGGGAACC GGCAAGACCC GGCTGGCGGT GGAACTCGCC
GCCGACCTGG TCGAGTCCCA TCCGGACGGT GTCTGGTTCG TCGACATCGC CACCGTGGCG
GACCCGGGGC TGGTGGCGTT CGCTGTCGCC GACGTACTCG GCCTCCGTCC GGAACCCGGC
CGCCCGATGG TGGACACCCT GGTGGAGTAC GCCGCCGCCC GCCGGATGCT GGTGCTGCTG
GACACCTGCG ACGCCCAGCC GGCGGCGTCG GCCGAGGCGA TCTCCCGGCT ACTCGCCGGC
GGGGTGGGGG TGCGGGTACT CGCCACCAGC CGGGAGTCGT TCGGGCTTCC CGGCGAGGTG
GTGTGGCGGA TTCCTCCACT CTCGGTCGAC CCGCCGGTGG CCGGAGGGGA GAGTGACGCG
GTAGCCCTGC TGCTGGACCG GGCTACGGCG GCGCGCGGTG GTCGACGGCC CGATCCGGTG
GAGTCGGCGG ACCTGCGGAG GGTGGTGCGG CGGCTGGACG GCGTGCCGCT CGCCATCGAG
TTGGCCGCCG CCCGGTTGCG GGTGCTTTCA GTGGGGCAAC TCGCCGAACG TCTCGACGAT
GTGCTGGGCA CCCTCGACGC TGGCCGAGAC AGCCTGGAGC CCTCGGCGTC CGAGCGGCAC
CGCACCATGC AGGCCACCCT CACCTGGTCG TACCGGACGC TGAACCCGCG GGCCGCCCGG
CTGCTGCGCT GGCTGGCCGT GTTCGCCGGG CCGGTGGATC TGTCGACGGT GGAGTGGCTA
CTCGAGGACG ATCAGCTCGA TCCGTTGTCG GTACTGGTGG ACAAGTCGAT GGTGCTGGCC
GAACCGGACG TCGGCGGCAG CACCTACCGG ATGCTCGATC CGATTCGCGC GTACGCGGCC
CGCCGGCTGG CCGCGGCCGG GGAGGAACAG GCCGCGCGGA ACCGGCACGT GGCATGGTCC
GCGCACGCCC TACGGCGGTT ACGCCTGGGC CCGGACGGAC GGCCGGTGAC CCTCTCGCTG
TACGCGCTCG ACCCGCTCGT CGGGGAGCTG CGAGCGGCCC TTCGTTGGTG CGCGACGGGT
GGCAGCGCCC AGGCGGGTCT CGCGCTCGCC AGTGGGTTGG ACCAGTGGTG GCGGGAGCGG
GGACTGGCCT GGAAGGGCCG GCACTGGTTG TCTCGGCTGT ACGACCGAAC CGTCGAGACA
GGTGAGAGCA TTCCGGACGC GGAACTGGCG GCGGCATACC ACATGCACTC GTTGCACGCG
GGCGCGGACG GTGAGTTCGC CGAGGAGTTG CGCTACTCGC AGCGGGCGGA GGCGGTGGCC
CGGCAGGTCA GGGACGCCGG CCTGCTGGCC CGGGTGCTGG CGGGCCGGGC GGCCCCGCTG
GTTGACCTGG GACAGTTCGC CGAGGCGGAA CAGGTGTGCC GGGAGGTCAT TGACTGGGCG
CATCGGCAGG ACGTGGTGGG TGACGCCCTG TTCGCGGTGT TCAGCCTGGC GGAGTTGCTG
TGGCGTCGGG GTGCGCTGGA CGAGGCGGCG GAGTTGCTCG GCGCGGCCCG CCCGGTCGAG
GCGGGTCGCC CGTCGGAGCG GGGCCGCCGT ACGGTGGACA TGCTGCTCGG CCTGGTGGCG
CTGGCCCGAG GTGATCTGAT CGCCGCGCAC GAGCACCTGC TGGTGGCGCT GCGGTCCCGG
ATGGCGCACG GCTTCCACCG TCGTGCCTGT GACACGTTGG AGGCGATCGC GGTGCGGTGT
GCCGCGGGTG CCGACCCGCT GACCGCCGCG CGACTCTTCG GCGCGGCGCG GGCGACGCGG
GCCGCGTTAC GGTCGGCGCC AGGCATCTAC GGCGAGTACT TCGCGCGGTG GCAGGCGCAG
GTGCGCGAGA CACTCGGCGA CGTGACCTTC GACGGTGCGT ACGGCGAGGG CGCGGGGTGG
GGCATGGAGG AAGCGGCGGC GGTCGCGCTC GGGGTCGAGC ACCCGGACCT GGCCGCCGGT
TCGACCCGGT TCGCCGCCGG TGTCGCTCAG CCCACGATCG CCAGCCCGTT GGGGCCCGCC
ACTGCACACC CCGATCACGC CTGA
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| Protein sequence | MSPRIHLPTG WVTFVFTDIE GSTRLAQLLG PDYRPLLREH RRLLRRTVAA TEGAELLTEG
DSFFLAFADA SAALTACLTA QRALISHDWP TPDATPRVRM GLHTGWAEPR DGEYASPEVH
RAARIAAAAH GGQVLCSAAT VHHADPMPGG ASLLDLGLYR LRGFDDRERL FQLIAPGLER
QFPRPRTAEA AAHNLPTQVS SFVGRQAEWA ELRRLVESSR LVTVLGAGGT GKTRLAVELA
ADLVESHPDG VWFVDIATVA DPGLVAFAVA DVLGLRPEPG RPMVDTLVEY AAARRMLVLL
DTCDAQPAAS AEAISRLLAG GVGVRVLATS RESFGLPGEV VWRIPPLSVD PPVAGGESDA
VALLLDRATA ARGGRRPDPV ESADLRRVVR RLDGVPLAIE LAAARLRVLS VGQLAERLDD
VLGTLDAGRD SLEPSASERH RTMQATLTWS YRTLNPRAAR LLRWLAVFAG PVDLSTVEWL
LEDDQLDPLS VLVDKSMVLA EPDVGGSTYR MLDPIRAYAA RRLAAAGEEQ AARNRHVAWS
AHALRRLRLG PDGRPVTLSL YALDPLVGEL RAALRWCATG GSAQAGLALA SGLDQWWRER
GLAWKGRHWL SRLYDRTVET GESIPDAELA AAYHMHSLHA GADGEFAEEL RYSQRAEAVA
RQVRDAGLLA RVLAGRAAPL VDLGQFAEAE QVCREVIDWA HRQDVVGDAL FAVFSLAELL
WRRGALDEAA ELLGAARPVE AGRPSERGRR TVDMLLGLVA LARGDLIAAH EHLLVALRSR
MAHGFHRRAC DTLEAIAVRC AAGADPLTAA RLFGAARATR AALRSAPGIY GEYFARWQAQ
VRETLGDVTF DGAYGEGAGW GMEEAAAVAL GVEHPDLAAG STRFAAGVAQ PTIASPLGPA
TAHPDHA
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