Gene Sare_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0429 
Symbol 
ID5708406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp490495 
End bp491478 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content72% 
IMG OID641269954 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001535349 
Protein GI159036096 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.404702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000592634 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCGTATC CCGAGATTCG ACCCCGGCGG CTGCGCCGCA GCACTGCCCT GCGGCGGCTG 
GTCGCCGAGA CCCGGGTCGA CCCCGCCGAG CTGGTCGTGC CGCTGTTCGT CAAGGAGGGG
CTGACCGAGC CACGGGCCGT GGCGTCCCTG CCGGGAGTGC TCCAGCACAC CCGGGAGTCG
CTGCGCAAGG CCGCGGTCGC GGCGGTTCAG GCCGGGGTCG GCGGGATCAT GCTTTTCGGG
GTGCCGGCCA CCCGGGACGA GCGTGGCTCC GGCGGGGCCG ACCCGAACGG CATCCTCAAC
GCCGCCATCC GGGACGTCGT CTCCGAGGTG GGCGACGCCA CCGTGGTGAT GAGCGACCTC
TGCCTGGACG AGTTCACCTC GCACGGGCAC TGTGGCCTGT TGACGCCCGA CGGGTCCGTG
GCGAACGACG CCACCCTCGC CGCGTACGCC GAGATGGCGG TGGCGCAGGC CGAGGCCGGG
GTCCACGTCG TCGGCCCGTC CGGGATGATG GACGGTCAGG TCGGCGCGGT TCGGCAGGCG
TTGGACGCCG CCGGCCACCG GGACGTGACG ATCCTCGCCT ACACGGCGAA GTACGCGTCA
GCGTTCTACG GCCCGTTCCG CGACGCGGTG GAGTCGACGC TGGACGGCGA CCGTCGGACC
TACCAGCAGG ATCCGGCGAA CCTGCGTGAG TCCCTGCGTG AGGTGGCGCT CGACGTCGCC
GAGGGCGCCG ACATCGTGAT GGTCAAACCG GCGCTGCCGT ACCTCGACGT GGTCGCGGCG
GTTCGGGCCG CCGTCGACGT TCCGGTCGCC GCCTACCAGG TCTCCGGTGA GTACGCCATG
GTCGAGGCGG CTGCCGCGAA CGGCTGGATC GACCGCGAGC GGGTGATGGT GGAGACGCTC
ACCTCGATCC GTCGGGCTGG TGCCCAGATC ATTCTCACCT ACTGGGCGGT CGAGGCCGCG
CAACTGCTGC GCGAGCGCTA CTGA
 
Protein sequence
MPYPEIRPRR LRRSTALRRL VAETRVDPAE LVVPLFVKEG LTEPRAVASL PGVLQHTRES 
LRKAAVAAVQ AGVGGIMLFG VPATRDERGS GGADPNGILN AAIRDVVSEV GDATVVMSDL
CLDEFTSHGH CGLLTPDGSV ANDATLAAYA EMAVAQAEAG VHVVGPSGMM DGQVGAVRQA
LDAAGHRDVT ILAYTAKYAS AFYGPFRDAV ESTLDGDRRT YQQDPANLRE SLREVALDVA
EGADIVMVKP ALPYLDVVAA VRAAVDVPVA AYQVSGEYAM VEAAAANGWI DRERVMVETL
TSIRRAGAQI ILTYWAVEAA QLLRERY