| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0427 |
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| Symbol | |
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| ID | 5708404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 487935 |
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| End bp | 488903 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641269952 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001535347 |
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| Protein GI | 159036094 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.751162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00242186 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGTCC CCCTACGCCT CGGCACCCGG GGCAGCGCCC TGGCGATGGC CCAGTCCGGG
CAGGTCGCGC AGGCCCTCAC CGCGGCCACC GGCAACCCGG TGGAACTGGT CGAGGTGGTG
ACTGCCGGCG ACCGTTCCGC GGCCCCGGTG CACCGGCTCG GCGTCGGCGT GTTCGTGTCC
GCGCTGCGGG ACGCCCTCAC CGCGCGCACC ATCGATTTCG CGGTGCACTC GTTCAAGGAC
CTGCCCACCG CGGCGGCTCC CGGCCTGCAT GTCGCGGCCG TGCCACCCCG GCAGGATCCC
CGGGACGCGC TCGTCGCCCG TGCCGGCCGT ACGCTCGCCG AGCTGCCGCC CGGCGCCCGG
GTCGGCACTG GTGCGCTGCG TCGTATCGCC CAGCTACACG CGCTCGGGCT TCAGCTCGAC
GTCCAGCCGA TCCGGGGTAA CGTCGGCACC CGGCTGGCGC GGGTGCTCGG GCCGGAGGCC
GACCTGGACG CGGTTGTCCT GGCCCGGGCA GGGCTGGCCC GGCTGGATCG CACCGACACG
ATCACCGAGA CGCTCGACCC GATGCTGATG CTGCCCGCGC CCGCCCAGGG GGCGCTGGCG
GTGGAGTGCC GGTCCGACGA TTCGGACCTG GTCGAGCTGC TCGCTGTACT CGACCACGCA
CCGTCCCGCG CCACGGTCGT CGCGGAGCGG GCGTTGCTTG CCACCCTGGA GGCCGGGTGC
AGTGCCCCGG TCGCCGCCTA CGCCGAACTA GCCGAGGGCG ACGTCGGTGA AGAGATCTAC
CTGCGCGGGG CGGTGATCAG TCCGGACGGC ACGCGTGACC TCCGACTGTC TCGCACCGGA
ACGCCCGCCG ACGCGGTGGA GATCGGTAAG GCCCTCGCCG CTGATCTTCT CGAACTCGGC
GCCGACTCGA TCCTCGGCCA GGAAGGACAC TTCGGCCCGG GGACCCAGCA ATTTGGGAGC
ACAGTATGA
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| Protein sequence | MSVPLRLGTR GSALAMAQSG QVAQALTAAT GNPVELVEVV TAGDRSAAPV HRLGVGVFVS
ALRDALTART IDFAVHSFKD LPTAAAPGLH VAAVPPRQDP RDALVARAGR TLAELPPGAR
VGTGALRRIA QLHALGLQLD VQPIRGNVGT RLARVLGPEA DLDAVVLARA GLARLDRTDT
ITETLDPMLM LPAPAQGALA VECRSDDSDL VELLAVLDHA PSRATVVAER ALLATLEAGC
SAPVAAYAEL AEGDVGEEIY LRGAVISPDG TRDLRLSRTG TPADAVEIGK ALAADLLELG
ADSILGQEGH FGPGTQQFGS TV
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