Gene Sare_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0416 
Symbol 
ID5708230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp476134 
End bp477006 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content69% 
IMG OID641269941 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001535336 
Protein GI159036083 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.378719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0026302 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTGGCG GCGCGGTGCC GGAACAGCCC GGCGACCAGT GGGACCGGAA GGTGGCGAGC 
GGCCTGGCCT TCCTGCGCGA ACGGCTCGCC GGCGATTACG AGGTCGACGA GTTCGGCTTC
GACCCGCAGC TCACCGAGTC CGTGTTCCAT CCGCTGTTGC GGCTGCTCTA CCGGGACTGG
TTTCGCACCG AGGTCCTCGG GCTGGAGCAC GTGCCCGACG TCGGGGCCGG TCTCGTCGTG
GGCAATCATT CCGGCACGGT GGCCCTGGAC GCGCTGATCC TCTCCGCCGT GCTGCACGAC
CAGCATCCAC GGCATCGGTT TCTCCGCCTG CTCGGCGCAG ACCTCGTCTT CCGGATGCCG
GTGGTGTCGG CGGTCGCCCG CAAGGGCGGC GGCACGGTCG CCTGCAACCC GGATGCCGAG
CGCCTGCTCG ACTCCGGCGA GTTGGTCAGC GTCTTTCCCG AGGGCTTCAA GGGCGTCGGC
AAGCTGTACG CGGAACGCTA CAAGCTACAA CGATTCGGGC GGGGCGGTTT CGTCTCCGCC
GCGTTGCGGA CGGGCACCCC GATCGTGCCG GTGGCGATCG TCGGGGGTGA GGAGACCTAC
CCGATGCTCG CTGATGTGAA GCCCCTCGCG CGGCTGCTGA AGTTGCCGTA CTTCCCCGTC
ACGCCGACGT TCCCCTGGCT CGGCCCGTTG GGCATGGTGC CGCTGCCGAG CAAGTGGCTC
ATCGAGTTCT GTCCGCCGAT CCCCACCCAG CACCTGACCG ACTCGGCGGA TGACCCGCTG
GTGGTGTTCA ACCTCGCCGA CCAGGTGCGG GAGACCATTC AACAGACCCT GCACAGGTTG
TTGGAGCAGC GGCCGGACCC GTTCGGCCCC TGA
 
Protein sequence
MSGGAVPEQP GDQWDRKVAS GLAFLRERLA GDYEVDEFGF DPQLTESVFH PLLRLLYRDW 
FRTEVLGLEH VPDVGAGLVV GNHSGTVALD ALILSAVLHD QHPRHRFLRL LGADLVFRMP
VVSAVARKGG GTVACNPDAE RLLDSGELVS VFPEGFKGVG KLYAERYKLQ RFGRGGFVSA
ALRTGTPIVP VAIVGGEETY PMLADVKPLA RLLKLPYFPV TPTFPWLGPL GMVPLPSKWL
IEFCPPIPTQ HLTDSADDPL VVFNLADQVR ETIQQTLHRL LEQRPDPFGP