Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0397 |
Symbol | |
ID | 5705656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 457685 |
End bp | 458449 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641269922 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001535317 |
Protein GI | 159036064 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00949223 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTTCCG TCGCTGTCGT TACCGGGGCA TCCAGCGGGA TCGGGGCGGC CACCGTCCGC CGGCTCGCCG CCGAGGGATT CCACGTACTG GCTGCCGCCC GGCGCACCGA CCGGCTCGCC GACCTGGTCA AGGAGGTCGA GACCAGCGGA GGATCAGCCA CCGCGGTCAG CTGCGACGTG ACCTCGGACG AGTCGGTGGC CAGCCTCGCC GCCGCGGCGG CGACCGCGCC CGGTCCGGTC ACCCTGCTCG TCAACAACGC CGGAGGAGCA CGTGGCCTCG ATCCGGTGGA GACCGGCAGG GTCGGGGACT GGCAGTGGAT GTACGACGTG AACGTCCTGG GCACGCTGCG GGTCACCCAG GCACTTCTGC CGGCCTTGGT GGCCTCCGAG TCCGGCACCA TCGTCATCGT GTCGTCGACC GCCGGCTTCA CCGTGTACGA GGGCGGCGGC GGCTACGCCG CCGCCAAGCA CGCCCAGACC GCGGTCGCCG GCACCCTGCG GCTGGAGCTG TGCGGCCGGC CGGTACGGGT CGTCGAGATA GACCCTGGGA TGGTGCAGAC CGAGGAGTTC GCGTTGGTCC GTTTCGGTGG GGACGCCGAT CGGGCGGAGG CCGTCTACGC CGGAGTGCCC GAGCCGCTGG TCGCCGAGGA CGTGGCGGAC TGTGTCGCCT GGTGCGCTAC CCGCCCGCAC CACGTGAACG TGGACCGGCT GGTGGTTCGC CCGTTGGCGC AGGCCGCGCA GCACAAGGTC CACCGCGTCG GTTGA
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Protein sequence | MTSVAVVTGA SSGIGAATVR RLAAEGFHVL AAARRTDRLA DLVKEVETSG GSATAVSCDV TSDESVASLA AAAATAPGPV TLLVNNAGGA RGLDPVETGR VGDWQWMYDV NVLGTLRVTQ ALLPALVASE SGTIVIVSST AGFTVYEGGG GYAAAKHAQT AVAGTLRLEL CGRPVRVVEI DPGMVQTEEF ALVRFGGDAD RAEAVYAGVP EPLVAEDVAD CVAWCATRPH HVNVDRLVVR PLAQAAQHKV HRVG
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