Gene Sare_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0389 
Symbol 
ID5705648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp448824 
End bp449831 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content72% 
IMG OID641269914 
ProductLacI family transcription regulator 
Protein accessionYP_001535309 
Protein GI159036056 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0127409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG CGCAACGACC GACGCTTGAG GCGGTGGCCC GGCGGGCGGG CGTCTCCCGG 
GCCACCGTGT CGCGGGTGGT GAACGGCTCC ACCACGGTGG CCGAGCCGAT TCGCGAGGCG
GTGCACCGGG CGGTCGCCGA ACTGGGATAC GTGCCGAACC TGGCCGCTCG CAGCCTGGTC
ACCCAGCGAA CCGACTCGGT CGCGCTGGTC ATGCCCGAGG CGGCCACCCG GGTTTTCTCC
GACGACCAGG TCTTTCCCGG CATCATCCGG GGTGCCGCCC TCGAGTTGGA GGCAGCTGAC
AAGCAGCTGG TGCTGATGCT GGCCGGGTCG CGGGCCGGGC ATGAGCGGGT GGAGCGCTAC
ACCACCGGCC GGCACGTCGA CGGGGTGCTG TTCGCCTCGT TGCACGGCGC CGACCCACTA
CCCGGCCGGT TGACCCGGTT GGGCATCCCG GTGGTGTGCA GCGGCCGGCC GCTCGGTGAC
GCCTCCGTGC CGTACGTCGA CGTCGACCAT GTCGGTGGGG TGACTCGGGC CGTCCAGCAT
CTGATCGACG GCGGCCGGCG GCGGATCGCC ACCATCGCCG GACCGCAGGA CATGGTGGGC
GGGATCGAAC GGTTGGCGGG CTATCAGGCA GCGGTGACCT CGGCCGGGCT ACCGGAGTGG
GTGGCGTACG GTGACTTCAC CCGCGAGTCG GGAGTGGCCG CCATGCGCCG GCTGCTCGCC
GAGCATCCGG ACCTGGACGC GGTCTTCGCC GCCTCGGACC TGATGGCGCA CGCCGCCCTG
CGGACGCTGC GCACGGCAGG GCGGCGGGTG CCGGACGACG TCGCGGTGGT CGGTTTCGAC
GACATCGAGA CCGCCGCGTA CACCGAGCCG CCGCTGACCA CCGTCCGCCA GCCGATCCAG
GAGATCGGTC GGCGAATGAC CCGCCAGTTG CTGCGCCTTG CGGCGGGCGA GCCAATCGAA
CCGGCGGTTG TCCTTCCCAC CGAGTTGGTC CTCCGCGATT CGGCCTGA
 
Protein sequence
MTTAQRPTLE AVARRAGVSR ATVSRVVNGS TTVAEPIREA VHRAVAELGY VPNLAARSLV 
TQRTDSVALV MPEAATRVFS DDQVFPGIIR GAALELEAAD KQLVLMLAGS RAGHERVERY
TTGRHVDGVL FASLHGADPL PGRLTRLGIP VVCSGRPLGD ASVPYVDVDH VGGVTRAVQH
LIDGGRRRIA TIAGPQDMVG GIERLAGYQA AVTSAGLPEW VAYGDFTRES GVAAMRRLLA
EHPDLDAVFA ASDLMAHAAL RTLRTAGRRV PDDVAVVGFD DIETAAYTEP PLTTVRQPIQ
EIGRRMTRQL LRLAAGEPIE PAVVLPTELV LRDSA