| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0386 |
|---|
| Symbol | |
|---|
| ID | 5705081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 446739 |
|---|
| End bp | 447137 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641269911 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001535306 |
|---|
| Protein GI | 159036053 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0244583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAAC TCCGCCATGT CTCCACCCTC GCCGATGCCG ACTACGCGTA CGTCACCACC
GTCGAGCCGT CGACGCGCCT CGTCTTCACC GCGGGGGCGT GCCCGCTCGA CGCGAACGGC
CGCACGGTCG CCCCTGGTGA CCATGCCGCC CAGGCTCGGC AGGTGATGGC CAATCTGGAG
ACCGCCCTTG CCGCGGCCGG CGCCCGCCTC ACCGACGTCG CGAAGACCAC GGTGTACGTG
GCCTCGGCGC ACCAATCCGA CCTGGTGACC GTCTGGCAGG TCGTCCGGGA CACCTTCGAC
GACCACGATC CGCCCAGCAC CCTGCTCGGC GTGGCCGTGC TCGGCTATCC CGATCAGCTC
GTCGAGGTCG AGGCGGTTGC CGCCGTGGCC GCCGCGTGA
|
|---|
| Protein sequence | MPQLRHVSTL ADADYAYVTT VEPSTRLVFT AGACPLDANG RTVAPGDHAA QARQVMANLE
TALAAAGARL TDVAKTTVYV ASAHQSDLVT VWQVVRDTFD DHDPPSTLLG VAVLGYPDQL
VEVEAVAAVA AA
|
|---|
| |