Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0371 |
Symbol | |
ID | 5704422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 433646 |
End bp | 434416 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269896 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001535291 |
Protein GI | 159036038 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.677057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0150173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGGCG AGAATCTTCA GTTCACGGTT CTGGGTTGTG CGACGCCTTA TCCGAGTGTG GACAATCCCT GTTCCGGCTA CCTGGTGTCG GGTGGGGGCG CCCGGGTGTG GGTGGACGCG GGCAGTGGGA CGCTGGCTCA GCTGCAACGA CATGTCCGGC TGGACGAACT GGACGCGATC TGGGTCTCGC ACCTGCACGC TGATCACAGC GCCGACCTCC TGACCGCCTA CTACGGGGCG CTGTACGCCG ATATCCAGCT CGCGGCTCCG ATCCCGCTGT ACGGCCCGCC CGGCATCGCC GACCGATTGG CGCACTTCCT GACCAACACC GCGACCCGCA GCCCGATCGA ATCCGCCTTC GCCGTCGAAG AGCTACACGA CGGGCACCGG GTGGCGGTCG GCGCGCTGAC GTTGACCAGT CATGCGGTGG CGCACGGTAT TCCCGCTTTC GCTCTGCGTG TCGATGTTGG GGGGCGGTCG TTGGCGTACT CCGGGGACAC GGCCCCCTGT CCTGGCCTGA CGAGTCTGGC CAGGGGCTGC GATGTGCTGC TGTGTGAGGC CGAGAGCGCG CAGGCCCCGA GCAAGGGGGA ACGGGTTCAC CACACACCGG AGGATGCCGG TGACACTGCT CGCGTGGCCG AGGCAAGGCG CTTGATCGTT ACACACATCG GGCGGTTCCT CACCCCGCAG CAGGCGGTGG CACGCGCCTC GACCCGGTTT GACGGTCCCA TCGACTTCGC CGCCCCCGGT GCCACCCATT CGATCGACTG A
|
Protein sequence | MSGENLQFTV LGCATPYPSV DNPCSGYLVS GGGARVWVDA GSGTLAQLQR HVRLDELDAI WVSHLHADHS ADLLTAYYGA LYADIQLAAP IPLYGPPGIA DRLAHFLTNT ATRSPIESAF AVEELHDGHR VAVGALTLTS HAVAHGIPAF ALRVDVGGRS LAYSGDTAPC PGLTSLARGC DVLLCEAESA QAPSKGERVH HTPEDAGDTA RVAEARRLIV THIGRFLTPQ QAVARASTRF DGPIDFAAPG ATHSID
|
| |