| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0365 |
|---|
| Symbol | |
|---|
| ID | 5703859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 424082 |
|---|
| End bp | 425365 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641269890 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001535285 |
|---|
| Protein GI | 159036032 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0592694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGA CCGCGCAACC CCGGCCTGGT ACGCCGGTTC CCCCGCTGCG TCACAACCGT
GACTTCCTCC TGCTCTGGAG TGGGACCGCC GTCTCCCTCG TCGGTCTGAC CGTATCGACC
ATCGCCTACC CCTTGTTGAT CCTGGCCGTC ACTGGATCGA AGGCCGCAGC CGGTGTCGTC
GGCTTCTTCT CGCTCCTGCC GTCACTGCTG TTCCAACTGC CGGCAGGGGT GCTGGTCGAC
AGGTGGAACC GCCGTCGGCT GATGATCTGG TGTGACGTGA TCCGCGCCCT CGGCGCCGCG
AGTGTGGTCC TCGCGCTGGC TCTCGACGAG CTGACGTTGG CGCATGTGGT GGTGGTGGGG
TTCGTCGAGG GCACGATGTC GGTGTTCTTC AACCTCGCGG CACATGCCGC GGTGCCCAAC
GTCGTTCATC CGGACCACCT GTCGACCGCA CTGTCGCGTA ACGAGGCACG TTCCCGGGCG
GCGACCATGC TCGGCACCAC CCTCGGTGGC GTCCTGTTCG GCTTGAGCCG TGCCTTGCCG
TTCGCGCTGC ACGCGGTCAC CCATGTGATC TCGCTGGTCA CGTTGTTGTT CATTCGGTCT
GACTTCCAGA GCGACCGGCA GGTGCGTACC CGCACCACCG GGATGCTCGC CGAGGTCGGG
GAAGGAACGC GCTGGCTGTG GCGCCAGCCG TTCCTGCGCA CGGCCGCGCT GCTCGTCGCC
GGCAGTAACT TGCTGTTCCG CGCGCTGTTC CTTGTCGTCG TGGTGATGGC AACCGACGTC
GGCGCGTCGC CGGCGGCGGT CGGTGTGCTG CTCAGTGTCG CCGGCGCTGG CGGGGTGCTC
GGTTCCCTCG TCGCGGGCTG GTGTCAACGC CGGCTGCCGC TTTCGGCCCT GGTGGTCGGC
GCGAACTGGG TGTGGGCCGT ACTCATGGGC GTGATCGTGC TCACTGACAG CCTGTATCTG
CTCGCCGCCG CCTACGCCGC GATGTGGTTC GTCGGACCGG TGTGGAATGT CGCCGTCGCC
ACCCATCAGC TCCGTGTCAC CCCGGACCGG CTGCGGGGTC GGGTCCTTGG CGCGATGGGC
CTGCTCGCCA GCGGCGCGTT GCCGGTTGGC GCCCTGATCG GCGGTCTGCT CCTGGAATGG
TCCGATGCGC GCACCGCCGC GCTGGTGCTC GCCGGCTGGA TGGTGCTGCT GGCCCTTGTC
GCGACGATCG CCCCCTCGCT GCGAAGGGCG ATCGCACCTG TCGAGACCAC GACCACCCCC
GACGCCGAAC CAGCCGTTCG ATGA
|
|---|
| Protein sequence | MTTTAQPRPG TPVPPLRHNR DFLLLWSGTA VSLVGLTVST IAYPLLILAV TGSKAAAGVV
GFFSLLPSLL FQLPAGVLVD RWNRRRLMIW CDVIRALGAA SVVLALALDE LTLAHVVVVG
FVEGTMSVFF NLAAHAAVPN VVHPDHLSTA LSRNEARSRA ATMLGTTLGG VLFGLSRALP
FALHAVTHVI SLVTLLFIRS DFQSDRQVRT RTTGMLAEVG EGTRWLWRQP FLRTAALLVA
GSNLLFRALF LVVVVMATDV GASPAAVGVL LSVAGAGGVL GSLVAGWCQR RLPLSALVVG
ANWVWAVLMG VIVLTDSLYL LAAAYAAMWF VGPVWNVAVA THQLRVTPDR LRGRVLGAMG
LLASGALPVG ALIGGLLLEW SDARTAALVL AGWMVLLALV ATIAPSLRRA IAPVETTTTP
DAEPAVR
|
|---|
| |