Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0340 |
Symbol | |
ID | 5707977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 378990 |
End bp | 379838 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269866 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001535261 |
Protein GI | 159036008 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.316076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00258596 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCGCG ACACCGCACT CGTCTCGGCC GACTGGGCCG AGAAGAACCT CGACACCCCG GGTGTCGTCT TCGTCGAGGT CGACGAGGAC ACCTCGGCCT ACGACACCGG CCACCTGCCC GGCGCGATCA AGCTCGACTG GAAGACCGAC CTGCAGGATC AGGTACGCCG GGACTTCGTC AACAAGGACC AGTTCGCGGC GCTGCTCTCC GAGCGGGGCA TCGCCAACGG CGACACCGTC ATCCTCTACG GCGGCAACAA CAACTGGTTC GCCGCGTACG CGTACTGGTA CTTCGCGCTC TACGGCCACC GCGAGGTCAG CCTGCTCGAC GGCGGTCGCA AGAAGTGGGA GCTGGACGCC CGTCCGCTGA CCAAGGAGGT GGTGTCCCGC CCGGCGACCC GGTACGTGGC GCAGGAGCCG GACAACACCA TCCGGGCGTT CCGCGACGAG GTGGTGGCTG CCATCGGGAC GAAGAACCTG GTCGACGTGC GCAGCCCCGA CGAGTACGCG GGGCGCCTGC TCGCCCCCGC CCACCTTCCG CAGGAGCAGG CGCAGCGCGC GGGCCACGTG CCCACCGCGA TCAGCGTGCC GTGGTCCAAG GCGGCCAACG AGGACGGCAC GTTCAAGTCC GACCAGGAAC TGCGCAAGAT CTACGCCGAC GCCGGGCTGG ACGACGGCAG GGAAACCATC GCCTACTGCC GGATCGGCGA GCGTTCCTCG CACACCTGGT TCGTGCTTCA GGAACTGCTC GGCCACCAGA ACGTGAAGAA CTACGACGGC TCCTGGACCG AGTACGGCTC GCTGGTCGGC GTGCCGGTGG CGCTCGGCGA CGAGCCCGGG GAGGAATGA
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Protein sequence | MSRDTALVSA DWAEKNLDTP GVVFVEVDED TSAYDTGHLP GAIKLDWKTD LQDQVRRDFV NKDQFAALLS ERGIANGDTV ILYGGNNNWF AAYAYWYFAL YGHREVSLLD GGRKKWELDA RPLTKEVVSR PATRYVAQEP DNTIRAFRDE VVAAIGTKNL VDVRSPDEYA GRLLAPAHLP QEQAQRAGHV PTAISVPWSK AANEDGTFKS DQELRKIYAD AGLDDGRETI AYCRIGERSS HTWFVLQELL GHQNVKNYDG SWTEYGSLVG VPVALGDEPG EE
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