Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0328 |
Symbol | |
ID | 5704330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 367147 |
End bp | 368040 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641269854 |
Product | NUDIX hydrolase |
Protein accession | YP_001535249 |
Protein GI | 159035996 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.121747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000751962 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACGAGCG ACGGCGACGG TTTTCCCGTT CCACCGGTGG TGGTGGAGCA CGCCCGGCGG TTCCGCGAGC AGGGGGGTAA CCCGGCGGTA CCGCGGGTGG CGGCGACCGT ACTGCTGCTC CGCCCGACCG GCGGCGCCGC TGTTGCGGGC GGCGGGGCGG ATCGCCAGGG AGGCTCCGCC ACAGTGGTGT CCGCGAGCCC GGACGGCTTC GAGGCGTACC TGATCCGTCG GGTCGCGGCG ATGGCCTTCG GTGGGGTGTA CGCCTTCCCG GGCGGCGGCG TGGACCCGTC GGATTCGACG GCGCATGTCG ACTGGGCCGG GCCGACACCG GCGCAGTGGG GAGCCCGGCT GCGACTGGCT CCGACGGCGG CGCAGGCGGT GGTCTGCGCC GCCGCACGGG AGGTGTTCGA GGAGGCGGGG GTCCTGCTCG CCGGTCCCGA CGCCGACACG GTGGTCGGTG ACGTGTCCGG CGACGACTGG GAGTCGGCCC GGGCTGCCCT GGAACGGCGG GAGGTGGGCT TCGCCGGCCT ACTCGCCGAG CGAGGACTCA CCCTCCGGTC GGATCTGCTG CTGCCGTGGA GTCGGTGGAT CACGCCCGAG TTCGAGCCGC GTCGGTTCGA CACGTACTTC TTCGTCGCCC AGCTACCGGT CGGGCAGCGC ACCCGGGACG TCTCCGGTGA GACCGACCGG ACACTGTGGA TCACTCCGGC CGACGCCTGC GCCGCCGGGG AGCTGACCAT GCTCCCACCC ACCCTGGTCA CCCTCGGTCA GGTCGCCGCC TGCCAGAACC TGGCCGGTGT CGTCGCTGCC GCGGCGACCC GCGATTCGGC GAGCCCGGTG ACGCCCCGGC TGGAGGACAC CGGCACCGGG CCGCCCCGTT TCCTCCTTCG CTGA
|
Protein sequence | MTSDGDGFPV PPVVVEHARR FREQGGNPAV PRVAATVLLL RPTGGAAVAG GGADRQGGSA TVVSASPDGF EAYLIRRVAA MAFGGVYAFP GGGVDPSDST AHVDWAGPTP AQWGARLRLA PTAAQAVVCA AAREVFEEAG VLLAGPDADT VVGDVSGDDW ESARAALERR EVGFAGLLAE RGLTLRSDLL LPWSRWITPE FEPRRFDTYF FVAQLPVGQR TRDVSGETDR TLWITPADAC AAGELTMLPP TLVTLGQVAA CQNLAGVVAA AATRDSASPV TPRLEDTGTG PPRFLLR
|
| |