Gene Sare_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0305 
Symbol 
ID5703973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp338620 
End bp339906 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content71% 
IMG OID641269831 
Productthreonine synthase 
Protein accessionYP_001535226 
Protein GI159035973 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00217301 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGTCCA CGCTCGCCCC GTCCGGGATC GACCCCGCCA CCAGTCCGGC CCGCGCCCTG 
GTCTGCCGAG CCTGTTCGGC CCGGTACCCG CTCGTCGCCC AGCACGCCTG CTACGAGTGT
TTCGGCCCGC TGGAGGTCGA CCACGACACC GCCGCGCTGG CCGCCGTCAC CCGTGAGCAG
ATCGAGGCCG GCCCGCGCAA CATCTGGCGG TACGCGGGGC TGCTGCCCGT CGGCCAGGAC
CCGGCCACCC GGGTCACCCT GGACCCGGGC TTCACCCCAC TGGTCGCGGC TCCACGGCTG
GCCGCCGAGG TCGGTCTCAC CGCGCCGCTG TGGGTCAAGG ACGACAGTGC CAACCCGACC
CACTCGTTCA AGGATCGGGT GGTGTCGGTG GCGCTGACCG CCGCCCGGTC GTTGGGCTTC
ACCCGGTTCG CCTGTGCCTC CACCGGAAAC CTGGCCAACT CGGTCGCCGC TCACGCCGCC
CGCGCCGGTG TCCCGTCGGT CGTCTTCATC CCCAGCGACC TGGAGCAGGG CAAGGTGGTC
ACCACCGCCG TGTACGGCGG GGACCTGGTC GCGATCGACG GGTCGTACGA CGATGTGAAC
CGGCTCTGCG GCGAACTGGT GGAGACCGAC GAGTTCGAGG ACACCGCCTT CGTCAACGTC
AACGTGCGGC CCTACTACGC CGAGGGGTCG AAGACGCTCG GCTACGAGGT GGCCGAGCAA
CTCGGTTGGC GGATCCCCGC CCAGGTGGTG ATACCGATGG CTTCCGGGGA ACTGTTGACG
AAGGTCGACA AGGCGTTCGC CGAGCTGGTC GAGGTCGGTC TGGTCGAGTC CCCGGCCGGC
GGCTGGCGGG TGTTCGGGGC GCAGTCGGCG GGCTGCAGCC CGATCGCCGC TGCTCTGCAC
GCCGGCAGCG ACACCATCGA ACCGGTCAAG CCGACCGGCA TCGCCAAGTC GCTGAACATC
GGTGACCCGG CGGCCGGCCC GTACGCGCTG GAGGCGGTCC GCCGCACCGG TGGTTGGATG
GCGGCTGCCG ACGACGACGA GATCCGCGCC GGGATCCGGC TGCTCGCCCG TACCGCCGGA
GTCTTCGCCG AAACCGCCGG TGGGGTGACC GTGGCGGTGC TGCGCACGCT CGTCGAGTCC
GGCCGGCTCG ACCCGACCGC GGAGACGGTG GTCTTCAACA CCGGTGAAGG GCTCAAGACC
CTGGATGCGG TGGCGGGTCA GGCTGGTCCC AGCCACCGGA TCAAGGCGTC GCTGCGGGCC
GCCCGGGACG CCGGCCTGTT GGGTTGA
 
Protein sequence
MSSTLAPSGI DPATSPARAL VCRACSARYP LVAQHACYEC FGPLEVDHDT AALAAVTREQ 
IEAGPRNIWR YAGLLPVGQD PATRVTLDPG FTPLVAAPRL AAEVGLTAPL WVKDDSANPT
HSFKDRVVSV ALTAARSLGF TRFACASTGN LANSVAAHAA RAGVPSVVFI PSDLEQGKVV
TTAVYGGDLV AIDGSYDDVN RLCGELVETD EFEDTAFVNV NVRPYYAEGS KTLGYEVAEQ
LGWRIPAQVV IPMASGELLT KVDKAFAELV EVGLVESPAG GWRVFGAQSA GCSPIAAALH
AGSDTIEPVK PTGIAKSLNI GDPAAGPYAL EAVRRTGGWM AAADDDEIRA GIRLLARTAG
VFAETAGGVT VAVLRTLVES GRLDPTAETV VFNTGEGLKT LDAVAGQAGP SHRIKASLRA
ARDAGLLG