| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0295 |
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| Symbol | |
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| ID | 5707748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 328524 |
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| End bp | 329267 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641269822 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001535217 |
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| Protein GI | 159035964 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.963194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.327663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCT CGAACAGCGC GACGCGGGTC GCGATCGTCA CCGGCGGCTC CCGAGGTATC
GGCCGTGCGA TCGTCGAACG GCTGGCCTCC GACGGCTACC ACGTCGTCGT GGGCTACCGC
GAGAACCGGA CCGAGGCGGA AGCCGCGCTA CAGGTAATTC GGGAAGCTGA CGGCAACGCG
ATCGCGATCG CCGCCGACGT GACCGACGAG ACGTCGGTGG TCGAGCTCTT CGACGGCGCC
GAGCGGGAGT TCGGTGGAGT CGACGTCGTG GTGCACGCCG CGGGCGTGAT GGCCCTGGCA
CCACTGGCCG ACCTCGACCT TGACCAGCTC GACCGCCTCC TGCGAGTCAA CGTGCGCGGA
ACCTTCGCCG TCGACCAGCA GGCTGCCCGA CGGGTACGTC CCGGCGGCGC CATCATCAAT
CTCTCCAGCT CGCTCACCCG CTTCGCCCGC CCCGGCTACG CCGCCTATAC GGCGAGCAAG
GGCGCCGTCT CCGCGATCAC CCTCATCCTC GCCCGCGAGC TGAGGGGGCG GGATGTGACG
GTCAACGCGG TGGCGCCCGG CCCGACCGCG ACGGCCCTGT TCCTTGAGGG CAAGGACGAG
CAGACCCTCG CTCAGATTGC GGCTGAAGCG CCGTTGGAGC GCCTCGGCAC CCCACAGGAC
GCCGCCGAGC TGGTGGCATT CCTGGCCGGC CCGGCCCGCT GGATCAACGG TCAGGTGCTG
TTCGCCAACG GCGGCGCGAT CTGA
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| Protein sequence | MTTSNSATRV AIVTGGSRGI GRAIVERLAS DGYHVVVGYR ENRTEAEAAL QVIREADGNA
IAIAADVTDE TSVVELFDGA EREFGGVDVV VHAAGVMALA PLADLDLDQL DRLLRVNVRG
TFAVDQQAAR RVRPGGAIIN LSSSLTRFAR PGYAAYTASK GAVSAITLIL ARELRGRDVT
VNAVAPGPTA TALFLEGKDE QTLAQIAAEA PLERLGTPQD AAELVAFLAG PARWINGQVL
FANGGAI
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