| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0287 |
|---|
| Symbol | |
|---|
| ID | 5705260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 320761 |
|---|
| End bp | 321723 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641269814 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001535209 |
|---|
| Protein GI | 159035956 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.490636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCCACG CAGCCACGAC CAGTGCGGCG GACCGTGAGG TCGTCGTCGC ACTCGACGTC
GGCGGCAGCG GGATGAAGTG CGCCCTGGTC CGCCGGGACG GCACGGTCAC GCACACCGAA
CACCACCTGA CCGGCGCCGC GCGCGGTCCG GCCGCGGTGA TCGACACCAT CCTGGACGTC
GCCGAGGCCC TGGCCGACAC GGCCCGCCGG GAAGGACTCG CCCCGGTGGC CCTCGGCCTC
GCCGTCCCGG GCGTCATCGA CGAGGCGCAG GGCGTGGCTA TCTGGTCGGC GAACATCGGC
TTCCGCGACG TACCCCTACG GAAGCTGGCT GCGGCGCGGC TGGGGATGCC GGCGGCGCTC
GGCCACGACG TACGCGTCGG CGGCCTCGCC GAGGCACGGC TCGGAGCCGG CCGCTCCGCC
CGGCACGTCC TCTTCGTCGC CATCGGCACC GGCATTGCCG CCGCCCATGT GATCGATGGC
GCGGCGGCGG CCGGCGCGCA CGGCGCTGCC GGGGAGCTCG GCCACGTCCT GGTCCGTCCC
GGCGGCCCAC GGTGCGGCTG CGGGCGCGAC GGATGCCTGG AGGCGGTCGC GTCCGCCTCG
GCGGTCGCCC GCCGCTACGC GGAGCTGGCC AGCACCGCCC CCGACGCACC GGAGGCGAGC
GCGGCCGAGG TGGCCACCCG CGCCGCCGCC GGTGATCCGC TGGCCCAGCA GGTCTGGACG
GACGCGGTCG AGGCACTCGC CGACGGCCTC GCCACCGGCC AGGCCCTCTT CGACGTGGAG
GCGGTCGTCC TGGGCGGCGG GCTGGCCCGA GCCGGCGCCC AGCTGCTCGA CCCGCTGCGG
GCCGCGCTGC ACGATCGGAT GACCTTCCAC CGCGAGCCAC GGCTGGTCCC GGCGGCCCTC
GGCGCCGAGG CTGGCTGCCT TGGCGCCGCC CTGCTCGCCC TCGACGACCT GGAGAAGCCA
TGA
|
|---|
| Protein sequence | MGHAATTSAA DREVVVALDV GGSGMKCALV RRDGTVTHTE HHLTGAARGP AAVIDTILDV
AEALADTARR EGLAPVALGL AVPGVIDEAQ GVAIWSANIG FRDVPLRKLA AARLGMPAAL
GHDVRVGGLA EARLGAGRSA RHVLFVAIGT GIAAAHVIDG AAAAGAHGAA GELGHVLVRP
GGPRCGCGRD GCLEAVASAS AVARRYAELA STAPDAPEAS AAEVATRAAA GDPLAQQVWT
DAVEALADGL ATGQALFDVE AVVLGGGLAR AGAQLLDPLR AALHDRMTFH REPRLVPAAL
GAEAGCLGAA LLALDDLEKP
|
|---|
| |