Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0269 |
Symbol | |
ID | 5705284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 299357 |
End bp | 301585 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641269797 |
Product | RecD/TraA family helicase |
Protein accession | YP_001535192 |
Protein GI | 159035939 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.130609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACG TGACTGCTGC GCCCCGTCCC GCCCTGGCGA CACTCGAGGC GGTGTTGGAG CGGCTCACGT ACGTCAACGA GGAGACCGGC TACACCGTCG CCCGGGTGGC CACCGACGGC GGTGGTGACC TGCTGACGGT GGTGGGCGCT CTGCTGGGCG CGCAGCCAGG GGAGAGCCTG CGGCTGCACG GTCGGTGGTC CTCGCACCCC AAGTACGGTC GACAGTTCGA GGTCGACTCG TACACCACGG TCCTACCCGC CACGATCCAG GGCATCCAGC GCTACCTCGG CTCGGGCCTG GTGAAGGGCA TCGGACCGGT GTTCGCCGAA CGGATCGTCG CCCACTTCGG CTTGGACACG CTGCGGATCA TCGAGGAGGA ACCGGGCCGC CTGGTGGAGG TCCCCGGGCT GGGCCCCAAA CGCACCGCGA AGATCACCGC GGCGTGGGAG GAACAGCAGG CCATCAAGGA GGTCATGGTC TTTCTTCAGG GCGTCGGCGT CTCGACCTCC CTCGCGGTAC GGATCTACAA GCAGTACGGC GACACCTCCA CCGACGTGGT CACCAAGGAG CCGTACCGGC TGGCGGCCGA CGTGTGGGGC ATCGGTTTCA AGACCGCCGA CACCATCGCC CAGGCGGTCG GCATCCCCCA CGACAGCCCA CAGCGGGTCA TGGCCGGCCT GCAGTACACA CTCTCCGAGG CCACTGACAA CGGCCACTGC TACCTGCCCG AGCCCGAGTT GGTCACGGAC GCCACGAAGA TCCTCGACGT GCCCGCCGAT CTCGTCGCCC GCTGTCTCGA CGACCTGGTC GCCGACGAGG GGGTCGTTCG CGACACGCTG CCCGGCAGCG ACGCCGAGTC GGTGCGCGCC GTGTATCTGG TGCCGTTCCA CCGGGCGGAG AGGTCGCTCG CCTCCAGCCT GCTGCGCCTG CTCAGCGATG GGAACGATCG GTTGCCTCAC TTCGTGGGCG TCGACTGGGC CAAGGCCCTG GCCTGGCTGA GGGCGCGCAC CGGTAACGAC CTCGCTCCCG AGCAGGAGCA GGCGGTTCGG CTCGCGCTGA CCTCGAAGGT CGCGGTGCTG ACCGGTGGGC CGGGGTGCGG CAAGAGCTTC ACCGTCCGTT CCATCGTCGA ACTCGCCGCC GCCAAGAAGG CCAAGGTCAC CCTGGTGGCG CCGACCGGAC GTGCCGCCAA GCGCCTGTCC GAGCTGACCG GACATCCCGC CGCCACCGTG CATCGGTTGC TGCAGCTGCG CCCCGGCGGG GACGCCTCCT ACGATCGGGA CAACCCGCTC GACGTCGATC TGCTCGTCGT GGACGAGGCC TCCATGCTCG ACCTCATCCT CGCCAACAAA CTCGTCAAGG CCGTCCCACC CGGCGCCCAC CTGCTCCTGG TCGGGGACGT CGACCAACTT CCCTCGGTCG GCGCCGGCGA GGTGCTGCGC GATCTGCTCG CCGCCCCCAC CGTTCCGCGG GTGCGGCTGA CCCAGATCTT CCGCCAGGCC GCCCAGTCCG GCGTCGTCAC CAACGCGCAT CGCATCAACG CCGGCCGCCC ACCCCTGCTC CAGGGCCTGC CGGATTTCTT CCTGTTCGCC TGCGACGACA CCGAGGCCGC CGCCGCCCGC ACCGTAGACG TCGCCTGTAC CCGCATCCCC GCCACGTTCC GGCTCGACCC CCGCCGGGAC GTGCAGGTCC TCACCCCCAT GCACCGTGGA CCCGCCGGCT CCGGGACGCT GAACACCCTG CTCCAGCAAC GACTCACCCC CCATCAGGAA GGGCTACCGG AGCGGCGCGC GGGCGGGCGG GTGTTCCGCG TCGGCGACAA AGTCACCCAG ATCCGCAACA ACTATGACAA GGGTCAGGCC GGTGTCTTCA ATGGCACCCT CGGCATCGTC ACCGATCTCT CAGCCGAGGA ACAAACCCTG ACGGTACGCA CCGACGAGGA CGAGAGCATC GACTACGACT TCGACGAACT CGACGAGCTG GCCCACGCCT ACGCCATGAC CATCCACCGC TCGCAGGGCT CCGAATACCC TGCTGTCGTC ATCCCCCTGA CCACCAGCGC GTGGATGATG CTGCAACGCA ACCTGCTCTA CACCGCCGTC ACCCGCGCCA AACAACTCGT CGTCCTCGTC GGCTCCCGCC GGGCTCTCAG TGCCGCTGTC CGCACCGTCG GCGCCGGCCG CCGCCACACC GCGCTCAACC ACCGTCTGGA CGCCGCGACC GACCGGTAG
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Protein sequence | MADVTAAPRP ALATLEAVLE RLTYVNEETG YTVARVATDG GGDLLTVVGA LLGAQPGESL RLHGRWSSHP KYGRQFEVDS YTTVLPATIQ GIQRYLGSGL VKGIGPVFAE RIVAHFGLDT LRIIEEEPGR LVEVPGLGPK RTAKITAAWE EQQAIKEVMV FLQGVGVSTS LAVRIYKQYG DTSTDVVTKE PYRLAADVWG IGFKTADTIA QAVGIPHDSP QRVMAGLQYT LSEATDNGHC YLPEPELVTD ATKILDVPAD LVARCLDDLV ADEGVVRDTL PGSDAESVRA VYLVPFHRAE RSLASSLLRL LSDGNDRLPH FVGVDWAKAL AWLRARTGND LAPEQEQAVR LALTSKVAVL TGGPGCGKSF TVRSIVELAA AKKAKVTLVA PTGRAAKRLS ELTGHPAATV HRLLQLRPGG DASYDRDNPL DVDLLVVDEA SMLDLILANK LVKAVPPGAH LLLVGDVDQL PSVGAGEVLR DLLAAPTVPR VRLTQIFRQA AQSGVVTNAH RINAGRPPLL QGLPDFFLFA CDDTEAAAAR TVDVACTRIP ATFRLDPRRD VQVLTPMHRG PAGSGTLNTL LQQRLTPHQE GLPERRAGGR VFRVGDKVTQ IRNNYDKGQA GVFNGTLGIV TDLSAEEQTL TVRTDEDESI DYDFDELDEL AHAYAMTIHR SQGSEYPAVV IPLTTSAWMM LQRNLLYTAV TRAKQLVVLV GSRRALSAAV RTVGAGRRHT ALNHRLDAAT DR
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