Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0260 |
Symbol | |
ID | 5705410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 287992 |
End bp | 288465 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641269788 |
Product | hypothetical protein |
Protein accession | YP_001535183 |
Protein GI | 159035930 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.061234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000404846 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGGGCGAGC ACCCCGTGAC CGGATCCGGA ACGAGCCCGA ACCCGGACCG AACCCCGAAA GCCGACGACT CGGCGGCGTC CACCCGCGGT CCCGACCCGG GCAGCGCCGG CATGACAGCG GACGGCGCGG CCGGCTCCGC GGTGCCCAGC GCCGGAATGA GCGCCGACAC CACCAGCGCC CCCGCGGGCG GCACTCCCGG CTCCGGGATG AGGGCCGACA GCGGGACGTG GGCCCGCACG GTGGACATCG TCCCAGGGCC AGGCGGGGTG ATGACCGACG AGGTCGGCGT GGTCACGGGC GAGCTGACGC TGCGCACCGA GTATCTCGAC GGCCAGGTCA CGCTGCGTGT GCAGTACCGC GAGGCCGACG AGTGGTACGT CGTGACCGGC GGGCGGGCGC CGCTGCCCGA CCCGGCCAGC CTCGACACGG TGCACTCGAT CGCCGTTGCC CTGCTCGACC GTCCCGACGG CTGA
|
Protein sequence | MGEHPVTGSG TSPNPDRTPK ADDSAASTRG PDPGSAGMTA DGAAGSAVPS AGMSADTTSA PAGGTPGSGM RADSGTWART VDIVPGPGGV MTDEVGVVTG ELTLRTEYLD GQVTLRVQYR EADEWYVVTG GRAPLPDPAS LDTVHSIAVA LLDRPDG
|
| |