Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0235 |
Symbol | |
ID | 5705963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 264860 |
End bp | 265576 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269765 |
Product | hypothetical protein |
Protein accession | YP_001535161 |
Protein GI | 159035908 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000648077 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCGTCCCG GCCCTGACGA GTCCACCATC TACACCGACC ACGGCGAGGC ACAACGGATG CCGGGCCCGA CCATGACACC GCCCGCCTCG AAGGCTCCGA TGATTCCGAG GGAAAACTCG CCTCCGTCCC ACGAGATTGT CCGGGGAAAC ATGAGCTATC AGCTCAGCGC GATCGTCGCC GACGCCGGGT TGCTTCATGA GGAGACCCGT GGGCTGGACC ACGCGATCCT CGGTGACCTG CGACAGGACT TCGCGTTACT GCCGGTGACC CCGCAACTTG TCGAAGAACT GACCGGGGCG CCGCCGGACT ACACCGTCGT GGGCCCTGCC CGGGAGCACC CGTTCACGCT GGTTTTTTCC GCTGCGCTGA CCGAGACGTT GGCCGGCTGG TCGCAGCGTG GACCACTGGC GTACGTCGAG GCGGAGTTCG CCGGCGGTGT CGGCCACCAG GCAGCTGCGG TGTGGCTCGG CGGCCGGCGG TCCTGGGGGC CACGCTTCGA CTCGGTGTTC GACGGCCCGC GCGGGCAGTG GCCGATCAAT GCCGCCCTGG TCGAAGTGGG TGCGGAGTCC GGCGCATGGG TGGACCTCTT CGCCGAGCTC GGGCTGTACG TGGAGCGAAG CACCGCCGGC TGGTTGGCGC ACGGGCGGCG CGGGTCGGGG GTCGACTACT GGGACGAGTT GGTCGAGGAG TGGGAACGGC AACAAGAGAG GGAGTGA
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Protein sequence | MRPGPDESTI YTDHGEAQRM PGPTMTPPAS KAPMIPRENS PPSHEIVRGN MSYQLSAIVA DAGLLHEETR GLDHAILGDL RQDFALLPVT PQLVEELTGA PPDYTVVGPA REHPFTLVFS AALTETLAGW SQRGPLAYVE AEFAGGVGHQ AAAVWLGGRR SWGPRFDSVF DGPRGQWPIN AALVEVGAES GAWVDLFAEL GLYVERSTAG WLAHGRRGSG VDYWDELVEE WERQQERE
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