Gene Sare_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0231 
SymboldeoD 
ID5705993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp261285 
End bp261992 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID641269760 
Productpurine nucleoside phosphorylase 
Protein accessionYP_001535157 
Protein GI159035904 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0813] Purine-nucleoside phosphorylase 
TIGRFAM ID[TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.691256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00237783 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACGC ACATCGGCGC GAAGCCGGGA GAGATCGCCG AGCGGGTCCT GATGCCGGGC 
GACCCGCTGC GGGCGAAGTG GATCGCCGAG ACCTACCTTG AGGGCGCGCA GTGCTACTCG
ACCGTCCGCG GGATGTTCGG CTTCACCGGC CGTTGGAACG GGGTCGACGT GTCGGTCCAG
GGCTCCGGGA TGGGCATGCC GTCCGCCTCG ATCTACGCTC ATGAGCTGAT CAACGATTAC
GGCGTGCGGT CACTCATCCG GGTCGGCACC TGCGGCGCCC TCACCGATGA CCTACAGCTG
CGGGACGTGG TGGCCGCGAG CGGTTCCTCC ACCGACTCGA ACATGAACCG GATGCGCTTC
GATGGCCTGA TCGACTACGC CCCGGTCGCC GACTTCGGGC TGTTGCGTTC GTCGGTCGAG
GTGGCCGAGC GACGTGGCAT CACGATGCGG GTCGGGCCGG TCCTGGCTGC GGACGCCTTC
TACACCGCGC GGCGGGACCT CTACGATTCG CTCGCCGACT ATGGCGTGTT GGCGGTCGAG
ATGGAGTCGG CGGCGCTCTA CACCACCGCC GCCCGGCACA AGGCGCGCGC ACTGACGATC
CTGACGGTTT CCGATCACCT CCGCACCGGC GCGAAGACCA CCTCCGAGGA GCGGGAACAC
ACGTTCAGCC AGATGGTCGA GATCGCCCTG GACACCATCA CCGCCTGA
 
Protein sequence
MSTHIGAKPG EIAERVLMPG DPLRAKWIAE TYLEGAQCYS TVRGMFGFTG RWNGVDVSVQ 
GSGMGMPSAS IYAHELINDY GVRSLIRVGT CGALTDDLQL RDVVAASGSS TDSNMNRMRF
DGLIDYAPVA DFGLLRSSVE VAERRGITMR VGPVLAADAF YTARRDLYDS LADYGVLAVE
MESAALYTTA ARHKARALTI LTVSDHLRTG AKTTSEEREH TFSQMVEIAL DTITA