Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0231 |
Symbol | deoD |
ID | 5705993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 261285 |
End bp | 261992 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269760 |
Product | purine nucleoside phosphorylase |
Protein accession | YP_001535157 |
Protein GI | 159035904 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0813] Purine-nucleoside phosphorylase |
TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.691256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00237783 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTACGC ACATCGGCGC GAAGCCGGGA GAGATCGCCG AGCGGGTCCT GATGCCGGGC GACCCGCTGC GGGCGAAGTG GATCGCCGAG ACCTACCTTG AGGGCGCGCA GTGCTACTCG ACCGTCCGCG GGATGTTCGG CTTCACCGGC CGTTGGAACG GGGTCGACGT GTCGGTCCAG GGCTCCGGGA TGGGCATGCC GTCCGCCTCG ATCTACGCTC ATGAGCTGAT CAACGATTAC GGCGTGCGGT CACTCATCCG GGTCGGCACC TGCGGCGCCC TCACCGATGA CCTACAGCTG CGGGACGTGG TGGCCGCGAG CGGTTCCTCC ACCGACTCGA ACATGAACCG GATGCGCTTC GATGGCCTGA TCGACTACGC CCCGGTCGCC GACTTCGGGC TGTTGCGTTC GTCGGTCGAG GTGGCCGAGC GACGTGGCAT CACGATGCGG GTCGGGCCGG TCCTGGCTGC GGACGCCTTC TACACCGCGC GGCGGGACCT CTACGATTCG CTCGCCGACT ATGGCGTGTT GGCGGTCGAG ATGGAGTCGG CGGCGCTCTA CACCACCGCC GCCCGGCACA AGGCGCGCGC ACTGACGATC CTGACGGTTT CCGATCACCT CCGCACCGGC GCGAAGACCA CCTCCGAGGA GCGGGAACAC ACGTTCAGCC AGATGGTCGA GATCGCCCTG GACACCATCA CCGCCTGA
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Protein sequence | MSTHIGAKPG EIAERVLMPG DPLRAKWIAE TYLEGAQCYS TVRGMFGFTG RWNGVDVSVQ GSGMGMPSAS IYAHELINDY GVRSLIRVGT CGALTDDLQL RDVVAASGSS TDSNMNRMRF DGLIDYAPVA DFGLLRSSVE VAERRGITMR VGPVLAADAF YTARRDLYDS LADYGVLAVE MESAALYTTA ARHKARALTI LTVSDHLRTG AKTTSEEREH TFSQMVEIAL DTITA
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