Gene Sare_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0225 
Symbol 
ID5705987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp256674 
End bp257768 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content71% 
IMG OID641269754 
Producthypothetical protein 
Protein accessionYP_001535151 
Protein GI159035898 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.490189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.010649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTTTG AATCCACCCC TGACCGGTCG GCGCTACGGA GCTGGCTGCC CGGGTTTCTC 
GCGTTGGCCG CGATCTGGGG GTCCAGCTTC CTGTTCATCA AGATCGGGGT GCGTGAGCTG
CACCCGCTGC AGCTCACCCT CTACCGGGTC GGTACCGGCG CGCTGACGCT GTTGATCCTG
CTTGCCGTGC TGCGCGTCCG ACTGCCCCGT GAGCCGCGGA TATGGGCCCA TCTGGTCGTG
ACCGGTGCGC TCGGCGTGGC GCTCCCGTTC ACCCTGTTCG GCTACGGCGA GCAGCGGGTC
GAGTCCATGC TCGCCGGGAT CTGGAACGCC ACCACGCCGC TGGTCGTACT GCCGATGGCG
GTACTGGCCT TCCGCACCGA ACGGCTGACT GCTGCCCGAG CTGGGGGCCT CCTGCTGGGC
TTCCTCGGCG TGCTGATCGT ACTCGGGGTC TGGGAGGGGG TTGGCGGTGC GCACTTCACC
GGCCAGCTGA TGTGCCTCGG CGCCGCAACC TGCTACGGCA TTGCCATCCC ATACCAGAAG
AAGTTCGTCG TGGGCCAGTC CTACTCGGGG CTGGCCCTGT CCACGGCGCA GCTGTTGACG
GCGCTGGCGC TACTCGCGGT CGTCACGCCG TTCGTGGCTG GTGCCCCGCC GGCGCCCACC
GCCCTCACCG GCCCGGTCGT CGTCAGCGTG GCCGCGCTCG GCGCGGTCGG CACCGGACTG
GCCTTTGTGA TCCACTTTCG GAACATCCGG GTCGCCGGCG CGAGCACCGC CGCTACGGTG
ACCTATCTGA TTCCGGTCTT CGCGGTGCTG ATCGGCGTGT TCGCGCTCGG CGAGCGGCTG
ACCTGGCACC AGCCGGTCGG CGCCCTGGTG GTCCTGCTCG GCGTCGCCGT CACCCAGGGC
CTGATCGGTC CCCGTCGCCC TCCGCGCGCG CCCGCGCCAC CGTCCTCACC CGCCACGGTT
CCGGTCGCCG CCGGTCAGGA GCGGCTCCCG GCCCACACCA CCAGCCGTTC CGCCGGCCAG
GTGTTGACCA CCCGATCGGC GGGGACACCG CAGCGGGCGG CGCGTTCGCA GCCGAACCGC
TGCCAGTCGA GTTGA
 
Protein sequence
MTFESTPDRS ALRSWLPGFL ALAAIWGSSF LFIKIGVREL HPLQLTLYRV GTGALTLLIL 
LAVLRVRLPR EPRIWAHLVV TGALGVALPF TLFGYGEQRV ESMLAGIWNA TTPLVVLPMA
VLAFRTERLT AARAGGLLLG FLGVLIVLGV WEGVGGAHFT GQLMCLGAAT CYGIAIPYQK
KFVVGQSYSG LALSTAQLLT ALALLAVVTP FVAGAPPAPT ALTGPVVVSV AALGAVGTGL
AFVIHFRNIR VAGASTAATV TYLIPVFAVL IGVFALGERL TWHQPVGALV VLLGVAVTQG
LIGPRRPPRA PAPPSSPATV PVAAGQERLP AHTTSRSAGQ VLTTRSAGTP QRAARSQPNR
CQSS