| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0221 |
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| Symbol | |
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| ID | 5706125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 252999 |
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| End bp | 254159 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641269750 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001535147 |
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| Protein GI | 159035894 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.514226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00341518 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTGTGC GACGACTCCT CCCGGCGCCT AGCTCGTCCC TGGTTGTCAA CGCCGGTCTC
GGTGTGGCGG TGCTGCTCGG GGCGGCGCTG GCGTATCCGG CGTTCACCGG CCCGGATCGG
TCGGCGACCA CCGAACCGAG AACGCTGCCG GTCAGCCGGG CGACGGTGAC ATCCGTGGTC
TCCGTTGCCG GTTCGGTGCG CAGCGCGGTG ACCGCGAACG CGGTTTTCGC CACCAGTGGG
ACGGTGGCCG AGGTCTTGGC CACGGTCGGG GATTCGGTGA CCGAGGGGCA GGTACTGGCC
CGGCTTGACG CCACGGTGGT GGAACGCGAA CTGGCTGGTG CCGAGGCGGA CCTGACGGCG
GCGCGGGACG CGGTCGAGCG GGCGGCCGGG AACGGTGACT CCAGCACGCA GGCGGAAACC
GCGGTGGTCC AGGCGGAGCT GGCGGTCGCC GAGGCCCGGG AGAGGGTCGA CGGTGCCACC
CTCACCGCGC CGATGGCCGG GACGGTCGTC GCGGTCAACG GTGGCGTCGG GGATTCGGGG
GACGCGGGCG GCAGCACCGG TGGCACTGCC ACGGGTGGCA GCAGCACGGG CAGCACCAGT
GCCGGCTTCG TGCAGATCGC GGACCTCGAC CGGCTGGAGG TGAGCGCTGG GATACCGGAG
GCTGACGCGA CCTCGCTGAC CGTCGGGATG TCCGCCACGG TCAGCTGGAA CGCGCTGCCG
GGCACCACGG CCGGGGCGAG GCTCGCGGCT GTCGACCCGA ATGCCACCGT CACCAACGAT
GTGGTCACGT ACGGGATCAC CCTCAGCCTG GACGACCGTC CCGAGGCGGC TCGGCCCGGG
CAGAGCGTTC AGGTGACCAT TTCCCTTGGC ACGGCCGAGA ACGTCGTCGC GGTGAGCGCG
CTCGCCGTGA CCAGCATCGG CAACCGGCAC ACCGTGTCGG TGCTGGAAGA CGGCGCGCCG
GTCGTCCGCT CGGTCGAGCT GGGACTCCAG GGCGACCAAT TGGTGGAGGT CACCACGGGC
CTACGGGAAG GCGAGCGGGT GGTGCTGCCC AGCACCGGTG GGACGGACAC GCAGCCCGAC
ACCGACGGAG GGCGGGGCAG ACCAGCCGGG GGCGGCCTCC CCGGGGGCGG CGCTCCGGGT
GGCGGGCGGG GCGGCCGGTG A
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| Protein sequence | MRVRRLLPAP SSSLVVNAGL GVAVLLGAAL AYPAFTGPDR SATTEPRTLP VSRATVTSVV
SVAGSVRSAV TANAVFATSG TVAEVLATVG DSVTEGQVLA RLDATVVERE LAGAEADLTA
ARDAVERAAG NGDSSTQAET AVVQAELAVA EARERVDGAT LTAPMAGTVV AVNGGVGDSG
DAGGSTGGTA TGGSSTGSTS AGFVQIADLD RLEVSAGIPE ADATSLTVGM SATVSWNALP
GTTAGARLAA VDPNATVTND VVTYGITLSL DDRPEAARPG QSVQVTISLG TAENVVAVSA
LAVTSIGNRH TVSVLEDGAP VVRSVELGLQ GDQLVEVTTG LREGERVVLP STGGTDTQPD
TDGGRGRPAG GGLPGGGAPG GGRGGR
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