| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0205 |
|---|
| Symbol | |
|---|
| ID | 5706194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 230255 |
|---|
| End bp | 231172 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641269734 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001535131 |
|---|
| Protein GI | 159035878 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.165624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGAGG ACAAGGCGGC CCTGGCGTAC GGCGGTGGTT GGGTGGATCG GGCCGGTGCC
CTACGCGCCG ACCCGGACCG GCTGGCGGCG CTGCTGATCG CACCAGACAC CAGGTTCCTG
CCGCTGTGGC GGGACCGTTG CCTGGTCAAC GGGTCGGGTC CGGTTCAGCT GAACGGTGAG
GTAGCGGAGA GGGCCCGTGC CACCGCAGAG GAGACGGTCT TCCTCGGCTA CGCGGCAGGG
CGGGCGGTGT TTGCGGTGGA CCTGTCCGGG CTCACCCAGG AGGTCGCCCT GGCGACCGTC
GGAGCGACCG GTGTGGTGGA CGTCCGAGGA CTCGTCGGGC AGCTCGGCCC GGCCGAGGCA
GCCCTCCAGG CGTACGCGCG GGGCCTGCTG CACTGGCACC GGCAGCAGCA GTACTGCGGT
ACGTGCGGTG AGTCGACCAG GGCCCGGGAG GCCGGGCACG CCCGTCGGTG CTCGGGTCCG
AACTGCGACC GGCTGTACTT CCCCCGGATC GAGCCCGCCA TCATCGTGTT GGTGGAGGCA
CCCGGCGACT CTGGTCGTTG CCTGTTGGCC CGGCACGCTG GGACAGCCGA AGGCGCGTAC
TCGACCCTCG CCGGCTTCGT CGAGGTGGGC GAGACACTGG AGGACGCGGT CCGACGGGAA
GTCGCCGAGG AAGCCGGCGT GGTGGTGACC GACGTCGCGT ACCAGGGGTC GCAGGCGTGG
CCGTTCCCGG CGGGGCTGAT GGTGGGATTC CGGGCCACCG CGGCGACCGA CGAGATCCGG
GTGGACGGGG TCGAACTGCT GGAGGCACGG TGGTTCACCC GCGCCGAGCT GCGCGAGCGG
TCGGCGGCAG GTCATCCTCT CGGTCGGCTG GACTCGATCG GTCGCCACCT GCTCACCGGT
TGGCTGGCCA GCGGCTGA
|
|---|
| Protein sequence | MREDKAALAY GGGWVDRAGA LRADPDRLAA LLIAPDTRFL PLWRDRCLVN GSGPVQLNGE
VAERARATAE ETVFLGYAAG RAVFAVDLSG LTQEVALATV GATGVVDVRG LVGQLGPAEA
ALQAYARGLL HWHRQQQYCG TCGESTRARE AGHARRCSGP NCDRLYFPRI EPAIIVLVEA
PGDSGRCLLA RHAGTAEGAY STLAGFVEVG ETLEDAVRRE VAEEAGVVVT DVAYQGSQAW
PFPAGLMVGF RATAATDEIR VDGVELLEAR WFTRAELRER SAAGHPLGRL DSIGRHLLTG
WLASG
|
|---|
| |