Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0152 |
Symbol | |
ID | 5706559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 162987 |
End bp | 163700 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641269678 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001535078 |
Protein GI | 159035825 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000117397 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAGTG GATCCGACAG CCGTCCCCGT CATGAGCAGG TCGCGGCCGA CCTTCGATCC CGCATCATGT CCGGCGAGTT GCCGCCGGGG TCAGCGCTGC CGTCGATCCC GACGCTCGTG CGGCAGTACT CCGCTGCCAC CGCGACAGTC CAGCGTGCCC TTGGCGCACT GAAGGCGGAG GGCGCTGTCT ACAGCGAGGT GGGAAAGGGC GTCTATGTCC GACCGAGGCG ACCGCTGGTG GTGGAGGCGT CGGCTTACCT CGCTCCTACC TCCGACGGGT ACGCCTACCG GCTCCGCTCG GTGGCAGAGG TGGTGCCGCC AGCCGAGGTG GCGCGGGAAC TGGGGATCGG TGCGGGCGAA CGAGCGGTCC TGCGGCATCG GCTGCTGGTG TGTGGTGACG AGCCGGTCGA GCTGTCCTGG TCGTACTATC CGGCGGCAAT CGCCAGCGGT ACGGAGCTCG CCGAGCGGCG CAAGATCCCG GGTGGTGCCC CGCGGGCCCT GGCGGATCTG GGGTACCCGC AGCGGCAGAC GCGGGACCGG GTTTGCGCGC GGATGCCAAC GACGGAGGAG GTCGAAGCGC TTGACCTGCC GCCGTACGTT CCAGTGCTTC GCCAGCTACG GGTGATCCGG TCGGTTGACG CCAGACCGGT CGAGGTGTCG ATCCTCATCA AGGGCAGCCA CCGGCACGAA CTGCACTACG ACCAACGGGG GTAG
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Protein sequence | MASGSDSRPR HEQVAADLRS RIMSGELPPG SALPSIPTLV RQYSAATATV QRALGALKAE GAVYSEVGKG VYVRPRRPLV VEASAYLAPT SDGYAYRLRS VAEVVPPAEV ARELGIGAGE RAVLRHRLLV CGDEPVELSW SYYPAAIASG TELAERRKIP GGAPRALADL GYPQRQTRDR VCARMPTTEE VEALDLPPYV PVLRQLRVIR SVDARPVEVS ILIKGSHRHE LHYDQRG
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