Gene Sare_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0144 
Symbol 
ID5706584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp156384 
End bp157058 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID641269670 
ProductTetR family transcriptional regulator 
Protein accessionYP_001535070 
Protein GI159035817 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.522541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones3 
Fosmid unclonability p-value0.0000264507 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTCCAGCA CCCCCACCTT CAGGCGCCTG CCCCGAGCCG TCCGCGAGCA ACAGATGCTC 
GACGCGGCGG TCAAGGTCTT CTCCCGCCGC GGCTATCACG CGGCCAGCAT GGACGAGATC 
GCCGACGACG CCGGCATCTC CAAGCCGATG GTGTACGCGT ACCTGGGCAC CAAGGAGGAG 
CTCTTCATTG CCTGCCTGCA CCGCGAGGGC ACCCGGATGA TGCAGGCCAT CGCCGGCGCA 
GTCGCCCCCG ACCTGTCGGC CGACGAACGG CTCTGGCGCA GTCTGCGGGC GTTCCTCGGC 
TTCGTCGGTG CGCACCGGGA CGGCTGGGCG GTGCTCTACC GGCAGGCCCG GGGCGAGCAG 
CCCTTCGCCG GGGAGATCGC CGCCATGCGG AGCCGGATGG TCGAGATCGT CGCCGGGATG 
CTCGCGCACA CCCTGCGCGC CGAGTGCCGC GAGGTGGCCG AAACCGAGCT GGAGGTCGTC 
GCCTACGCTC TGGTCGGCGC CACCGAGTCG GTCGCCGACT GGCTCGTCGA CCACCCGGAG 
GCCGACCCGG AGCAGACCGC GACCCGGGTG ATGAACGTCG CCTGGGTTGG TGCCGCTCAA 
CTGCTCGCCG GTACCAGCTG GCATCCACCC ACGAGTCAGG GCGAGGCCCC TCCTGACGCG 
CCTTCAGCGG GTTGA
 
Protein sequence
MSSTPTFRRL PRAVREQQML DAAVKVFSRR GYHAASMDEI ADDAGISKPM VYAYLGTKEE 
LFIACLHREG TRMMQAIAGA VAPDLSADER LWRSLRAFLG FVGAHRDGWA VLYRQARGEQ 
PFAGEIAAMR SRMVEIVAGM LAHTLRAECR EVAETELEVV AYALVGATES VADWLVDHPE 
ADPEQTATRV MNVAWVGAAQ LLAGTSWHPP TSQGEAPPDA PSAG