Gene Sare_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0143 
Symbol 
ID5706583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp155863 
End bp156315 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content66% 
IMG OID641269669 
Productsterol-binding domain-containing protein 
Protein accessionYP_001535069 
Protein GI159035816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.110171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000248953 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGACT TCGACCCGGC CCGCTTCGCC AACGTCGGCC CCAAGGAGTT CGCGCAGCTG 
GTCAAGTCCA CCCCCGACGA CAAGATCACC GAGGTGATGT CGGGCGACCT CCGCGGCAAG
GTCCTCGACG AGGTCTTCGG CCGGATGCCG CAGCTGTTCC GCGCCGACCG GGCGGGCTCG
ACCAACGCGG TCATCCACTG GAACATCACT GGTCGTCCCG ACGGTGGCAC CGACACCTAC
GAGGTGGTCA TCGCCGACGG CGGCTGCACC GTCAACCAGA CCTCGCAGCA CGACCCGAAG
CTGAGCCTCA CCCTGGGCCC GGTGGAGTTC CTCAAGACCG TCTCCGGCGG CGCCAACCCC
GTCATGATGT TCATGACCGG CAAGTTGAAG GCCAAGGGCG ACCTGGGTCT GGCCGCCAAC
ATCGCGAACC TCTTCGACAT CCCCAAGGCA TGA
 
Protein sequence
MTDFDPARFA NVGPKEFAQL VKSTPDDKIT EVMSGDLRGK VLDEVFGRMP QLFRADRAGS 
TNAVIHWNIT GRPDGGTDTY EVVIADGGCT VNQTSQHDPK LSLTLGPVEF LKTVSGGANP
VMMFMTGKLK AKGDLGLAAN IANLFDIPKA