Gene Sare_0112 details

Gene Information

• Locus tag: Sare_0112
• Symbol: dnaK
• ID: 5707040
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora arenicola CNS-205
• Kingdom: Bacteria
• Replicon accession: NC_009953
• Strand: +
• Start bp: 126060
• End bp: 127895
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641269638
• Product: molecular chaperone DnaK
• Protein accession: YP_001535038
• Protein GI: 159035785
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 4
• Fosmid unclonability p-value: 0.000334679
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCACGTG CGGTCGGTAT CGACCTCGGC ACGACGAACT CCTGCGTCAG CGTCCTGGAG 
GGCGGTGAGC CCACCGTCAT CGCCAACGCG GAGGGCTCGC GGACGACCCC GTCGATCGTC 
GCGTTCGCCC GTAACGGCGA GGTGCTCGTC GGTGAGGTCG CCAAGCGTCA GGCAGTGACC 
AACCCGGACC GGACGATCCG GTCGGTCAAG CGGGAGGTCG GCACCAACTG GTCCGTCGAC 
ATCGACGACA AGAAGTACAC GCCGCAGGAG ATCTCGGCTC GCACGCTGAT GAAGCTCAAG 
CGGGACGCCG AGTCGTACCT GGGCGAGCAG ATCACCGATG CGGTGATCAC CGTTCCGGCG 
TACTTCAACG ACGGTCAGCG ACAGGCCACC AAGGAGGCCG GTGAGATCGC CGGCTTCAAC 
GTGCTGCGGA TCGTCAACGA GCCGACCGCG GCTGCCCTGG CGTACGGGCT GGACAAGGGC 
TCCAAGGAGC AGACCGTACT GGTCTTCGAC CTCGGCGGCG GCACCTTCGA CGTGTCGCTG 
CTGGAACTGG CCGAGGGTGT CATCGAAGTC AAGTCGACCA GCGGCGACAA CCTCCTCGGC 
GGTGACGACT GGGACCAGCG GATCATCGAC CACCTGGTCA AGACCTTCAA CGGTGAGCAC 
GGCATCGACC TGTCCCAGGA CAAGATGGCG ATGCAGCGGC TCAAGGAGGC GGCTGAGAAG 
GCGAAGATCG AGCTGTCCGC CGCTGCCACC AGCAACATCA ACCTGCCGTA CATCACCGCC 
GGCGCCGCCG GCCCGCTGCA CCTCGACGTG ACGCTCACCC GGGCCGAGTT CCAGCGGATG 
ACGCAGGACC TGCTGGACCG GTGCAAGGGC CCGTTCGAGC AGGCCGTCAA GGACGCCGGG 
ATCAAGGTCG CCGACGTCGA ACACGTCATC CTGGTCGGCG GCTCGACCCG GATGCCGGCC 
GTGACCGAGT TGGTCAAGGA CCTCACCGGC AGGGACCCCA ACAAGGGCGT GAACCCGGAC 
GAGGTCGTCG CCGTCGGTGC CGCCCTGCAG GCCGGTGTGC TCAAGGGTGA GGTCAAGGAT 
GTCCTGCTGC TCGACGTGAC CCCGCTGAGC CTCGGAATCG AGACCAAGGG GGGCATCTTC 
ACCAAGCTGA TCGAGCGCAA CACCACCATC CCGACCAAGC GCTCCGAGGT CTTCACCACG 
GCAGACGACA ACCAGCCGTC AGTGCTGATT CAGGTCTTCC AGGGTGAGCG TGAGATCGCC 
GCCTACAACA AGAAGCTCGG CACCTTCGAG CTGACCGGCC TGCCGCCGGC GCCGCGCGGT 
ATGCCGCAGA TCGAGGTCAC CTTCGACATC GACGCCAACG GCATCGTGAA CGTGCACGCG 
AAGGACCTCG GCACCGGCAA GGAGCAGAAG ATGACGGTCA CCGCCGGCTC CTCGCTGCCG 
AAGGAGGACA TCGAGCGGAT GCGTCGGGAC GCCGAGGAGC ACGCCGAGGA GGACAAGCGG 
CGTCGCGAGG AGGCGGAGAC CCGCAACCTG GCCGAGGCGC TCCAGTGGCA GACCGAGAAG 
TTCCTCGCCG AGAGCGGCGA CAAGCTTCCC ACCGAGTCCC GGGACCAGAT CAACGAGGCG 
CTTGGCGAGC TGCGCAGCGC ACTCGGTGGT CAGGACATCG AAAAGATCAA GTCGGCGCAC 
GCGCAGCTGG CCCAGGTCTC CCAGCAGGCC GGCTCCCAGC TCTACACCCA GCAGGGTGAG 
CAGGCCGGTG CGACCGGAGC CCAGGCCGGC GGTGCGCAGG CCGGTGGCCC GGACGACGTG 
GTCGACGCGG AGATCGTGGA CGAGGACAAG AAGTGA 

 

Protein sequence

MARAVGIDLG TTNSCVSVLE GGEPTVIANA EGSRTTPSIV AFARNGEVLV GEVAKRQAVT 
NPDRTIRSVK REVGTNWSVD IDDKKYTPQE ISARTLMKLK RDAESYLGEQ ITDAVITVPA 
YFNDGQRQAT KEAGEIAGFN VLRIVNEPTA AALAYGLDKG SKEQTVLVFD LGGGTFDVSL 
LELAEGVIEV KSTSGDNLLG GDDWDQRIID HLVKTFNGEH GIDLSQDKMA MQRLKEAAEK 
AKIELSAAAT SNINLPYITA GAAGPLHLDV TLTRAEFQRM TQDLLDRCKG PFEQAVKDAG 
IKVADVEHVI LVGGSTRMPA VTELVKDLTG RDPNKGVNPD EVVAVGAALQ AGVLKGEVKD 
VLLLDVTPLS LGIETKGGIF TKLIERNTTI PTKRSEVFTT ADDNQPSVLI QVFQGEREIA 
AYNKKLGTFE LTGLPPAPRG MPQIEVTFDI DANGIVNVHA KDLGTGKEQK MTVTAGSSLP 
KEDIERMRRD AEEHAEEDKR RREEAETRNL AEALQWQTEK FLAESGDKLP TESRDQINEA 
LGELRSALGG QDIEKIKSAH AQLAQVSQQA GSQLYTQQGE QAGATGAQAG GAQAGGPDDV 
VDAEIVDEDK K