Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0109 |
Symbol | |
ID | 5707037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 122104 |
End bp | 123279 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269635 |
Product | pyruvate dehydrogenase (acetyl-transferring) |
Protein accession | YP_001535035 |
Protein GI | 159035782 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.99267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000248753 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAGG GCGACCCCGG GGTCAACACC CGCGGCCGGC GGGCCGTACC CCGATCCAGG AAGGGCGCGA CCGGCGACCC CGAGCTGGTG CAGCTACTCA CCCCCGAAGG TGAGCGCATC GAGAGTGTGA CCGGGCCGGA CGGCATCGAG TACCGGGTCG ACTTCACCGA CGAGGAGTAC CGCGGCTTCT ATCGGGACCT GGTGCTGGTG CGGAAGCTGG ACGCCGAGGC CACCGCCCTG CAGCGGCAGG GCGAACTGGG CCTCTGGGCG AGCCTGCTCG GCCAGGAGGC GGCCCAGGTC GGTTCCGGCC GGGCGCTCCG CACGCAGGAC ATGGCCTTCC CGACCTACCG GGAGCACGGC GTCCTCTACT GCCGGGGTAT CGACCCGATC ATGCCGCTGG GCCTGTTCCG CGGGGTCGAT CAGGGCGGCT GGGATCCGAA CGAGTTCAAG TTCAACATGT ACACGATCGT GATCGGGGCA CAGGCCCTGC ACGCGACCGG ATACGCCATG GGCGTCACCA TGGACGGCAA GACCGGTACC GACGAGGGCG AGGCGGTGAT CGCCTACTTC GGCGACGGCG CCACCAGCCA GGGGGACGTC AACGAGTCCT TCGTCTGGGC CAGCGTGTTC AACGCGCCGA TGGTCTTCTT CTGCCAGAAC AACCAGTACG CCATCTCGGA GCCGCTGGAG CGGCAGACAC GCATTCCGCT CTACCGGCGG GCCGCCGGCT TCGGCTTCCC CGGCCTCCGG GTGGACGGCA ACGACGTGCT GGCCACGTAC GCGGTGACCC GGCACGCACT GGACAACGCG CGACACGGGC AGGGCCCGAG CCTGATCGAG GCGTACACCT ATCGGATGGG GGCGCACACC ACCTCCGACG ACCCCACCCG GTACCGGATC GCCAGCGAGG TCGAGGCATG GCAGGCGAAG GATCCGATCG CTCGGATGAA GACCTTCCTG CAGAAGCAGA AGATCGCTGA CGACGGTTTC TTCACCGAGG TCGACGAGCA GGCCAAGCGT GAGTCGGTGC ACCTGCGCGA GCGGGTGCTG GAGATGCCGA ACCCGGAGCC GGGCAGCATG TTCGACCACG TCTACCCCAA CGGATCGCCG CTGGTCGACC AGCAGCGGGC GCAGTTCAGC CAGTACCTGG AGTCGTTCGA GGGGAGCGCG CACTGA
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Protein sequence | MAKGDPGVNT RGRRAVPRSR KGATGDPELV QLLTPEGERI ESVTGPDGIE YRVDFTDEEY RGFYRDLVLV RKLDAEATAL QRQGELGLWA SLLGQEAAQV GSGRALRTQD MAFPTYREHG VLYCRGIDPI MPLGLFRGVD QGGWDPNEFK FNMYTIVIGA QALHATGYAM GVTMDGKTGT DEGEAVIAYF GDGATSQGDV NESFVWASVF NAPMVFFCQN NQYAISEPLE RQTRIPLYRR AAGFGFPGLR VDGNDVLATY AVTRHALDNA RHGQGPSLIE AYTYRMGAHT TSDDPTRYRI ASEVEAWQAK DPIARMKTFL QKQKIADDGF FTEVDEQAKR ESVHLRERVL EMPNPEPGSM FDHVYPNGSP LVDQQRAQFS QYLESFEGSA H
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