Gene Sare_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0104 
Symbol 
ID5707053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp115830 
End bp116453 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content69% 
IMG OID641269630 
ProductTetR family transcriptional regulator 
Protein accessionYP_001535030 
Protein GI159035777 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.000192911 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGAGT CGCCCCTGAC CCGGCAGGCG ATCCTGACCG CCGCCCTGGC TCTCGTCGAC 
GAGCAGGGCA TCGAAGCGCT GAGCATGCGC CGGCTGGCCG CCGCGCTCAA GGTCGACCCG 
ATGTCGATCT ATCACCACGT ACCCAACAAG GCGGCGCTCG TCTCCGGCCT GGTGCAGACG 
GTCTTCTCCG AGATGGCGCT GCCCGCACCT GGCGGCTCCT GGCCGGTGCA GGTCCGCGCG 
TGGGCTCGGG CCTACCGGGA CCTGGCCCTG GCCCACCCCA ACCTCGTGCT CCAGATCGTC 
ACGGACGCCG CTGCCGTCTC CGAGGCCGCA ATCCTGGTCA GCGAGCCGCT GTACGCCGCC 
CTGGACAGCG CCGGCCTCGG GGCCCGTGCG GTGGTGGACA GCGCAAACAC GCTGATCGAC 
TTCGTCAACG GGTACACCCT CGCCCTTGCC GAGGGCACGA CATCACAGTC AGCCGGCGTC 
GGCTCGATGG GCGAACGTCT GGCGGCCATG GACCCCGACC AGGTGCCCAC GATGTGTCAG 
GTTCACGATG CGCTGAAGGA CGAGCAGACG ACGTCCAGCG GCTTCGAAGC GGGACTCGAC 
ATCATCATCC GTGGCATCTC ATGA
 
Protein sequence
MSESPLTRQA ILTAALALVD EQGIEALSMR RLAAALKVDP MSIYHHVPNK AALVSGLVQT 
VFSEMALPAP GGSWPVQVRA WARAYRDLAL AHPNLVLQIV TDAAAVSEAA ILVSEPLYAA 
LDSAGLGARA VVDSANTLID FVNGYTLALA EGTTSQSAGV GSMGERLAAM DPDQVPTMCQ 
VHDALKDEQT TSSGFEAGLD IIIRGIS