| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0093 |
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| Symbol | |
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| ID | 5707063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 104846 |
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| End bp | 105523 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269619 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001535019 |
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| Protein GI | 159035766 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00042868 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCACCT CCGCACCGAC CCGCCTCAAG CCGGTCGACC TCGGCAAACC TCGGATGCGC
GGCTGGCTGC ACGCGTACGC GTTCTTCGTC GCCCTCGTCT GCGGGGCCGT GCTCTGCTCC
ATCGCCGCAT CCCGGCCCGG CTGGTCGCCA CTGGTCAGCA CCCTGGTCTA CAGCCTGACC
GTCTGTGGCC TCTTCGGCAC CAGCGCGCTC TACCACCGAC GGGTGTGGTC AGAGCGCGGC
TACCAAGTCA TGCGGCGCAT GGACCATTCG ATGATCTTCG TGTTCATCGC TGGTACGTAC
ACGCCGTTCT GCGTTCTGTT GCTGGAGCCC CGCCCGGCGA CGATCATGCT CTCGCTGGTG
TGGGGTGGGG CACTCGGCGG TGTGGCACTC AAACTCATCT GGCCGCACGC CCCGCGCTGG
GTCTCCGCGC CGCTCTACCT GGCGCTCGGT TGGGTCGCGG TGGCGATGCT GCCAGACATC
CTCCGCGCGG GCGGGGTCAC CGCCCTGGTC CTGCTGATCG TCGGGGGCGC GATCTACAGC
GTCGGCGCGT TCAGCTACGC CCTGCGCCGA CCCAACCCGT GGCCCACCGT CTTCGGTCAC
CACGAGTTCT TCCACGCCTG CACCCTGGTC GCCGCGATCT GCCACCACAT CGCGATCTAC
TTCGCCCTCT TCGCCTAG
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| Protein sequence | MTTSAPTRLK PVDLGKPRMR GWLHAYAFFV ALVCGAVLCS IAASRPGWSP LVSTLVYSLT
VCGLFGTSAL YHRRVWSERG YQVMRRMDHS MIFVFIAGTY TPFCVLLLEP RPATIMLSLV
WGGALGGVAL KLIWPHAPRW VSAPLYLALG WVAVAMLPDI LRAGGVTALV LLIVGGAIYS
VGAFSYALRR PNPWPTVFGH HEFFHACTLV AAICHHIAIY FALFA
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