Gene Sare_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0084 
Symbol 
ID5707089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp97223 
End bp97864 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content73% 
IMG OID641269610 
Productrare lipoprotein A 
Protein accessionYP_001535010 
Protein GI159035757 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.332012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0350309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCA GGCACGCGCG TACCCGAAGG TTGTCCCCGA CCGCCATCGC GGCCACCGCA 
GCGGTTGGTG TCGCGCTCGC GATCGGTGGG ACCGTGGGCG CCGTCCGGCT CACCTCCGGC 
GACGTGTCCG ACCGGTCCGT CGCGGTCGCG CCGACCGAGG TCGACCCTCC GGCCGCCGCA 
TCCGCCCCGC CGAGCGGCTC GCCGAGCGCC AGTGGCTCAC CGAGCGCCAG TGGCTCACCC 
AGCTTGCCGA GTCCGATCGC GAGCCCGGCG TCGGTCCGGA AGACGCAGGC GCCCTCCCGG 
AGCAAGCCGA GGACCGCGAC TCCGCAGCCG ACCGCGACCA ACTCGTCCGC TCCTGCGGTG 
GAGACCGGCT CGTGTGGCGC CTCGTACTAC TCCGAGGGGC AGCTCACCGC GAGCGGGGAG 
CCGTTCGACC CGTCGGCCAT GACCGCCGCC CACAAGACCC TGCCGTTCGA CACGAGGGTG 
CGGGTCACCA ATCCGGCTAC CGGCACGTCG GTGACCGTGC GGATCAACGA CCGGGGCCCG 
TTCGTCGAAG GACGCTGCAT CGACCTGTCC CGGGCGGCCT TCGCCGAGAT CGCCCCACTG 
AGTGCGGGTC ACGTCGAGGT CCGGTACGAG GTCCTGGGCT GA
 
Protein sequence
MAGRHARTRR LSPTAIAATA AVGVALAIGG TVGAVRLTSG DVSDRSVAVA PTEVDPPAAA 
SAPPSGSPSA SGSPSASGSP SLPSPIASPA SVRKTQAPSR SKPRTATPQP TATNSSAPAV 
ETGSCGASYY SEGQLTASGE PFDPSAMTAA HKTLPFDTRV RVTNPATGTS VTVRINDRGP 
FVEGRCIDLS RAAFAEIAPL SAGHVEVRYE VLG