| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0079 |
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| Symbol | |
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| ID | 5707084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 93741 |
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| End bp | 94757 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641269605 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001535005 |
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| Protein GI | 159035752 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0146816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGTCG ACGGTGCGGT CCGGGCGGAC TTCTCCCAGC TCGCCGCCCC GTTACGACGC
GAACTGCTGG TCCACTGCTA TCGCATGCTC GGCTCGATGC ACGACGCCGA GGACCTCGTC
CAGGAAACCT ACCTGCGGGC CTGGCGCTCA TACGACGGCT TCGAGGGGCG TTCGTCGTTG
CGTACCTGGC TGTACCGGAT CGCCACCACC GTCTGTCTGC GCGCGATGGA AAACCGTGGG
CGGCGTCCGT TGCCGGTGGG GCTGGGCGCA CCGGGGGCCG ACCCGGAGGA ACGGCCGATT
CACGACGGGG AGACCCCGTG GTTGGAACCG CTGCCGGACG CCCTGCTGCG ACGGGAGCGC
GAGGACCCGG CTGCGATTGT GAGCGCCCGG CAGAGCGTCC GCCTGGCGTT CGTCGCCGCC
CTGCAGCACC TGCCGCCGCG ACAACGAGCC GTGCTGATCC TGCGTGACGT GCTCCAGTGG
CGAGCGGTGG AGGTCGCCGA CCTGTTGGGC GGGAGCCCGG CCGCGGTGAA CAGCCTGCTG
CAACGGGCCC GGGCCACCCT CGGCCATCTG TCGCCCCGGG AGGACCGGGT CACCGAGCCG
ACTACCGCCG CAGAGCGAGA ACTGCTCGAC CGGTATGTGA CGGCGTTCGA GGCCAAGGAC
ATAGCCGGAC TGGTGCGGTT GTTCGCGTCG GACGCGGTGT GGGAGATGCC GCCCTACACC
AGTTGGTACC GGGGCCCGCG GGACATCGGC CGGCACCTCG CGCTGCGCTG CCTGGCCACG
CCTGGCCCGG TGCGGCTGGT GCCCACGGCC GCCAACGGCC AGCCCGCACT GGCCGGCTAC
GTGGCCGCAG GAGGAAGTAC GTTCGCGCTG ACGAATCTCC AGGTGCTCTC GGTGACCAGC
ACGGCGATCA CCCGGATCAC CGTGTTCTCC GACCCGCGAC TGTTCACGGC CTTCGGGCTA
CCCGCATCGG TCGCCGCGGC CCAGATGAAT GAGCTGGCAC CGGCCAACGG CTGCTGA
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| Protein sequence | MTVDGAVRAD FSQLAAPLRR ELLVHCYRML GSMHDAEDLV QETYLRAWRS YDGFEGRSSL
RTWLYRIATT VCLRAMENRG RRPLPVGLGA PGADPEERPI HDGETPWLEP LPDALLRRER
EDPAAIVSAR QSVRLAFVAA LQHLPPRQRA VLILRDVLQW RAVEVADLLG GSPAAVNSLL
QRARATLGHL SPREDRVTEP TTAAERELLD RYVTAFEAKD IAGLVRLFAS DAVWEMPPYT
SWYRGPRDIG RHLALRCLAT PGPVRLVPTA ANGQPALAGY VAAGGSTFAL TNLQVLSVTS
TAITRITVFS DPRLFTAFGL PASVAAAQMN ELAPANGC
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