| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0078 |
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| Symbol | |
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| ID | 5707083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 91940 |
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| End bp | 93550 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269604 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001535004 |
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| Protein GI | 159035751 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0195486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACGACA CACACCCGGG CGACATGGGC CAGCGAGCGA CCCGCCGGAG CTGGTTCGGA
CTCGCGGTGC TCGGGCTGCC CACCCTCCTG CTGTCGCTCG ACCAGAGCGT GCTCTACCTC
GCGCTGCCGC ACCTGAGCGC CGATCTGGGG GCGGGCAGCA TCGAGTCGCT CTGGATTCTG
GACATCTACG GCTTCATGCT CGCGGGCTTC CTGGTCACCA TGGGGACTCT CGGTGACCGG
ATCGGCCGGC GCAAACTGCT GCTCATCGGG GCTGCTGCCT TCGGCGTCAG CACGGTCGCG
GCGGCGTACT CGGACAGCGC ACAGATGTTG ATCGTGACCC GCGCGGCGAT GGGTGTGGCA
GGCGCGACCC TGATGCCGTC CACACTGGCG CTGATCAGCA ATGTGTTCCA CGACGCCAAG
CAGCGCGGCG TGGCCATCGC GGTGTGGTTC AGCTGCCTCA TGGTCGGCGG CGCGCTCGGT
CCGGTGGTCG GAGGCGCCCT GCTGGAGCAC TTCTGGTGGG GTTCGGTCCT CCTGCTGGGC
GCGCCGATCA TGATGCTGCT GCTGGTTCTC GGGCCCGTAC TGCTACCCGA GTACCGCGAC
CCCTCGGCCG GACGAATCGA CCTACTCAGC GTACTGCTCT CCCTACTGAC GGTCCTACCG
ATCATCTACG GGATCAAGGA ACTCGCCTAC GACGGCTGGA CGGCGGAACC GCTGGTTGTC
ATGTCGGCCG GCGTGGTGTT CGGCGCGGTC TTCGTCACCC GTCAGCACCG GCTGGCGGAA
CCGCTGGTCG ACATCCGGCT CTTCCGGACC CGCGCGTTCA GCGCCGCGTT GGTGATCCTG
CTGTTCGGCT CGGTCACCAC CGGCGGGATC TACCTGCTGG TCAACCTGTA CCTACAGATG
GTCGAAGGGC TCTCGCCCCT GCGGACCGGA CTCTGGCTGC TGCCGTCCAC ACTGGCCATC
GTCGTGGGCT CGATGACGGC GCCGGCGCTG GCGCCGAGGG TACGGCCGGC GTACCTCATC
TCGAGCGGGT TGGCGGTGAC CACCTTCGGT TACCTACTAC TTACCCAGGT AGACCCGACA
GGTGGGCTGC CACTGCTGGT AACTGGTTTC GTGTTGGCGT TCCTGGGCGC CGGTCCGATG
GGCGCGCTCG GCACCGACCT GGTCGTCGGA TCCGCGTCGC CGGAGCAGGC CGGTTCTGCG
GCATCCCTGT CGGAGACCGG CAACCACCTC GGTATCGCGA TCGGAATCGC GGTGATGGGC
AGTATCGGGA CCACCGTCTA CCGGGACCGG ATCGACACCA CCGTGCCGGA CGGAATCGCC
GCCGACGCTG CCGAAGCGGC ACGGGAGAAC GTCACCGGGG CGGTCACCGC GGCGGAAGGG
CTGCCCGCCG GACCGGCGGC ACAGCTCCTC GATGCCGCGG CGACCGCCTT CACACACGGC
CTGAACACCG CCGCATACAT TGGCGCCGGG TTGTTTCTCA CGCTCGCCAT CGTCGCGGCG
GTATCGCTGC GCGAGACCCG GATGCCGGCA GGCGAAACGG CGAGCGGCGT CGCCGACGAG
TCCGCCCCGA CCGACACTGC CGCTCGGGCC GCCCAGAAGC CGACCGAGTG A
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| Protein sequence | MHDTHPGDMG QRATRRSWFG LAVLGLPTLL LSLDQSVLYL ALPHLSADLG AGSIESLWIL
DIYGFMLAGF LVTMGTLGDR IGRRKLLLIG AAAFGVSTVA AAYSDSAQML IVTRAAMGVA
GATLMPSTLA LISNVFHDAK QRGVAIAVWF SCLMVGGALG PVVGGALLEH FWWGSVLLLG
APIMMLLLVL GPVLLPEYRD PSAGRIDLLS VLLSLLTVLP IIYGIKELAY DGWTAEPLVV
MSAGVVFGAV FVTRQHRLAE PLVDIRLFRT RAFSAALVIL LFGSVTTGGI YLLVNLYLQM
VEGLSPLRTG LWLLPSTLAI VVGSMTAPAL APRVRPAYLI SSGLAVTTFG YLLLTQVDPT
GGLPLLVTGF VLAFLGAGPM GALGTDLVVG SASPEQAGSA ASLSETGNHL GIAIGIAVMG
SIGTTVYRDR IDTTVPDGIA ADAAEAAREN VTGAVTAAEG LPAGPAAQLL DAAATAFTHG
LNTAAYIGAG LFLTLAIVAA VSLRETRMPA GETASGVADE SAPTDTAARA AQKPTE
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