Gene Sare_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0045 
Symbol 
ID5707325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp53191 
End bp53994 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID641269570 
ProductWecB/TagA/CpsF family glycosyl transferase 
Protein accessionYP_001534972 
Protein GI159035719 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.561065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGG GCAAACGGAA CGTGCTCGGT GTTCTCGTGG ACGCCACCGA CTACGCCACC 
GCAACCGAGG CAGTCGTGAC GGCCGCGTAC GAGCGGCAAC CGCTGGCGCT GACCGCCCTG
GCCGTACACG GCGTGATGAC CGGGGTGCTC GATCCCGTAC ACAACGCTCG GTTGAACTCG
TTCGACGTGG TCACTCCGGA CGGGCAACCG GTGCGCTGGG CGCTCAACGT GCTGCACCGC
GCTGGCCTGA CCGACCGGGT CTACGGCCCG ACGCTCACCC TGCACGTGCT GTCCCGCTTC
GCCGACGAAG GTCTCCCGAT CTACCTGTAC GGGTCCACCG AGGAGACGCT CGCGAAGCTG
GTGCCGGCGC TGGAGCGCAT GTTCCCCGCG CTGAAGCTCG CTGGGGTGGA ACCGTCCAAG
TTCCGATCCG TACAACCCGG CGAGGATGTC GAGATCGCGG ATCGGATCAG GAGCAGCGGG
GCCCGACTCG TCCTGGTCGG GCTGGGCTGC CCGCGGCAGG AAATCTTCAC GTACGCCATG
CGGCCACTGC TGGACATGCC GCTGATGGCG GTCGGCGCGG CCTTCGACTA CCACGCGGGT
CTGCTGCGGC AGCCGCCGCC GTGGATGCAG CGGGCCGGCC TGGAGTGGTT CTGGCGGCTC
GGCCTGGAGC CGAAGCGCCT CTGGCGCCGA TACGTGATCC TCAACCCGGC ATACCTGTCC
CGGCTCGCCG CACAGAAGGT CGGTCTGTGG AAGGCGAAGC CGCCGGAGCC CGCCACCGAA
CGCCCCACCG GCTTCGCGGT CTGA
 
Protein sequence
MTRGKRNVLG VLVDATDYAT ATEAVVTAAY ERQPLALTAL AVHGVMTGVL DPVHNARLNS 
FDVVTPDGQP VRWALNVLHR AGLTDRVYGP TLTLHVLSRF ADEGLPIYLY GSTEETLAKL
VPALERMFPA LKLAGVEPSK FRSVQPGEDV EIADRIRSSG ARLVLVGLGC PRQEIFTYAM
RPLLDMPLMA VGAAFDYHAG LLRQPPPWMQ RAGLEWFWRL GLEPKRLWRR YVILNPAYLS
RLAAQKVGLW KAKPPEPATE RPTGFAV