Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0027 |
Symbol | |
ID | 5707328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 32505 |
End bp | 33272 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641269552 |
Product | GDSL family lipase |
Protein accession | YP_001534954 |
Protein GI | 159035701 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCTGGC GCAGTTTCGT GGCGGTCGGG GACAGCTTCA CCGAGGGGCT GAACGACGTG TACCCAGAGG GCGGCTACCG GGGCTGGGCC GACCTGGTGG CCACCCGGCT CGCCGCTGAG GTCGGTCCAG ACTTCCGGTA CGCGAACCTC GCTATTCGCG GCCGGCTCTT CCCCCGGGTG GTGGACGAGC AGGTTCCCGC GGCACTGGCG ATGCAGCCGG ATCTGATCAG CTTCGCAGCG GGTGGCAACG ACGTGCTGCG GCGAACGTTC GATCCGGACG ACATGATCGC GCGGTTCAAC GACGTGGTGG GGCGGCTCCG CTCCGGCGGC TCCGACGTGG TCCTGTTCCG GTTCGCCGAC GTGATGGCCC GCCTGCCTGG GCAGCGGCTG GTCGCCCCCC GGGTACGGCT ACTCAATCAG GCCGTCGGTG AGACCGCGCA ACGGCACGGG GCGATCCTGG TCGACCTGTA CGCCGACGAC ACGTACCTGA ACCCGATGTT GTGGAGCACC GATCGGCTGC ACCTCTCCTC GGCCGGGCAC CGCCGGGTGG CCGCTCAGGT GCTGACCGCG TTGGGGGTCA GTTGCGCCGA GGAGTGGCTG CTGGTCCCCG AGCGTCCACT GCCCAAGCCG TGGCTGACGG CCCGTACCGA CGATCTCCGC TGGGCCGCCC ACCACCTGGC TCCCTGGCTC ACCCGTCGCC TCACCGGCCG CAGCTCCGGC GACACGGTCA CGGCCAAACG CCCCACCCTG AGCCCGCTGA CGGACTGA
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Protein sequence | MGWRSFVAVG DSFTEGLNDV YPEGGYRGWA DLVATRLAAE VGPDFRYANL AIRGRLFPRV VDEQVPAALA MQPDLISFAA GGNDVLRRTF DPDDMIARFN DVVGRLRSGG SDVVLFRFAD VMARLPGQRL VAPRVRLLNQ AVGETAQRHG AILVDLYADD TYLNPMLWST DRLHLSSAGH RRVAAQVLTA LGVSCAEEWL LVPERPLPKP WLTARTDDLR WAAHHLAPWL TRRLTGRSSG DTVTAKRPTL SPLTD
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