Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0008 |
Symbol | |
ID | 5707388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 9641 |
End bp | 12160 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269531 |
Product | DNA gyrase subunit A |
Protein accession | YP_001534935 |
Protein GI | 159035682 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000116309 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGATA CCCCTGAGTC CACACCGAAC GAGCCCGACG CCCCCGAGAC CGGCGGCGCC GTCGTGGCGC ACGACCGGAT CGAGCCGGTC GGGCTCGAGG TGGAGATGCA GCGCTCCTAC CTCGACTACG CCATGAGCGT CATCGTCGGG CGTGCGCTGC CGGACGTCCG GGACGGGCTG AAGCCGGTCC ACCGCAAGAT CCTCTACGCG ATGTTCGATT CGGGGTACCG GCCCGACCGC GGGTACGTGA AGTGCTCCCG CGTGGTCGGC GACGTGATGG GGCAGTTCCA CCCGCACGGC GACTCGGCGA TCTACGACGC GCTGGTCCGG ATGGCCCAGC CCTGGGCGCT GCGCTACCCG CTGGTGGACG GAAACGGCAA CTTCGGGTCG CCGGGCAACG ACCCGGCCGC CGCGATGCGG TACACCGAGT GCAAGCTCGA CCCGCTGGCG ATGGAGATGC TGCGGGACAT CGACGAAGAC ACCGTCGACC TGCAGGACAA CTACGACGGC CGGGCCAAGG AGCCCACGAT CCTGCCGTCC CGGATCCCCA ACCTGCTGGT CAACGGCTCC GAAGGCATTG CGGTCGGGAT GGCCACCAAG ATCCCGCCAC ACAACCTGCG GGAGATCGGC GCGGCCGTGC AGTGGTGCCT GGAGCACCCG GAGGCCGACG AGGCGAGCAC GCTGGAAGCC CTCCTCGGGA TCGTCAAGGG GCCCGACTTT CCGACTCACG GCCTGATCGT CGGCCAGGCG GGAATCCAGG ACGCGTACCG CACCGGTCGC GGCTCGATCC GGATGCGAGC CGTGGTCGAG GTCGAGGAGG ACAAGCGCGG TCGCCCGGCG CTGGTGGTCA GCGAACTGCC GTACCAGGTG AACCCGGACA ACCTGGCTGA GCGGATCGCC GAGCTGATCC GGGAGGGGAA GCTGGGCGGG ATCGCCGACA TCCGGGACGA GTCCTCCGGG CGTACCGGCA TGCGGCTGGT GCTGGTACTC AAGCGCGACG CGGTCGCCAA GGTGGTGCTG AACAACCTCT ACAAGCACAC CCAGCTGCAG GAGACGTTCG GCGCGAACAT GCTGGCGCTG GTCGACGGCG TGCCGCGCAC GCTCAACCTG GCTCAGTTCA TCCGCTCCTA CGTCGAACAC CAGATCGAGG TGATCCGCCG GCGGACGGCG TTCCGGCTGC GCAAGGCCGA GGAGCGGGCA CACATCCTGC GCGGGCTGGC CAAGGCGCTG GACGCGCTCG ACGAGGTGAT CGCGCTGATC CGGCGCTCGC CGACGGTCGA CGACGCACGG CAGGGCCTGA TCCGGTTGCT GGACATCGAT GAGATCCAGG CGACCGCCAT CCTGGACATG CAGCTGCGAC GGCTGGCCGC GCTGGAACGG CAGCGGATCC TCGACGACCT GGTGAAGCTG GAACTGGAGA TCGCCGACTT CAAGGACATC CTGGCGAAGC CGGAGCGGCA GCGGCGGATC GTCTCGGAGG AGCTGGGCGA GATCGTCGCG AAGTGGGGGG ACGACCGGCG TACCCAGATC ATCCCGTTCG ACGGCGAGGT CTCGATGGAG GACCTGATCG CCCGCGAGGA CGTGGTGGTT ACCATCACCC GGACCGGGTA CGCGAAGCGC ACCAAGGTCG ACGCCTACCG TTCCCAGCGG CGTGGCGGTA AGGGGGTCAG CGGCGCGTCG CTTCGGCAGG ACGACATCGT CAGCCATTTC TTCGTGTGCT CGACGCACGA CTGGATCCTG TTCTTCACCA ACAAGGGGCG GGTGTACCGG GCCAAGGCAT ACGAGCTTCC GGAAGCCAGT AGGGTGGCCA AGGGCCAGCA TGTGGCCAAC CTGCTCGCCT TCCAGCCGGA CGAGCAGATC GCACAGATCA TCGAGATTTC CGACTACCAG GTGGCCCCCT ACCTGGTTCT GGCCACGAAG AACGGAGTGG TGAAAAAGAC GAAACTCGAG GAGTTCGACT CCAACCGGTC CGGCGGCATC ATCGCGATCA ACCTGCGCGA GGACGACGAA CTGGTCGGTG CCGCCCTGGT GGCGCCGGAG CAGGACCTCC TGCTGGTGTC GAAGAACGCC CTGGCGATCC GGTTCAATGC CTCCGACGAG GCACTGCGGC CGATGGGACG GGCGACCTCG GGCGTGATCG GAATGCGGTT CAGCGAGGAC GATGAGCTGC TCGCCATGGA GGTCGTGCGG CACGGACTGG ACGTCCTGGT GGCCACCAAC GGTGGCTACG CGAAACGTAC TCCGATCGAG GAATACCCGG TCCAGGGCCG GGGAGGTAAG GGCGTGCTGA CTGCGAAGAT CACCGAGCGG CGCGGTGGTC TGGTTGGCGC TGTCGTGATC GACCCGGACG ACGAGCTGTT CGCTATCACG AGTAACGGTG GTGTCATCCG GACTCCGGTG AAGCCTGTAC GCCGAACGCG TGACCGGAAC ACAATGGGTG TCAAGCTGAT GGACCTTCCG GATGGTGTGA CCATCGTGGC GATTGCTCGC AATGCCGACG AGCCTGACGA ACAGGACTAG
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Protein sequence | MTDTPESTPN EPDAPETGGA VVAHDRIEPV GLEVEMQRSY LDYAMSVIVG RALPDVRDGL KPVHRKILYA MFDSGYRPDR GYVKCSRVVG DVMGQFHPHG DSAIYDALVR MAQPWALRYP LVDGNGNFGS PGNDPAAAMR YTECKLDPLA MEMLRDIDED TVDLQDNYDG RAKEPTILPS RIPNLLVNGS EGIAVGMATK IPPHNLREIG AAVQWCLEHP EADEASTLEA LLGIVKGPDF PTHGLIVGQA GIQDAYRTGR GSIRMRAVVE VEEDKRGRPA LVVSELPYQV NPDNLAERIA ELIREGKLGG IADIRDESSG RTGMRLVLVL KRDAVAKVVL NNLYKHTQLQ ETFGANMLAL VDGVPRTLNL AQFIRSYVEH QIEVIRRRTA FRLRKAEERA HILRGLAKAL DALDEVIALI RRSPTVDDAR QGLIRLLDID EIQATAILDM QLRRLAALER QRILDDLVKL ELEIADFKDI LAKPERQRRI VSEELGEIVA KWGDDRRTQI IPFDGEVSME DLIAREDVVV TITRTGYAKR TKVDAYRSQR RGGKGVSGAS LRQDDIVSHF FVCSTHDWIL FFTNKGRVYR AKAYELPEAS RVAKGQHVAN LLAFQPDEQI AQIIEISDYQ VAPYLVLATK NGVVKKTKLE EFDSNRSGGI IAINLREDDE LVGAALVAPE QDLLLVSKNA LAIRFNASDE ALRPMGRATS GVIGMRFSED DELLAMEVVR HGLDVLVATN GGYAKRTPIE EYPVQGRGGK GVLTAKITER RGGLVGAVVI DPDDELFAIT SNGGVIRTPV KPVRRTRDRN TMGVKLMDLP DGVTIVAIAR NADEPDEQD
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