Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0005 |
Symbol | |
ID | 5707578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5889 |
End bp | 6494 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641269528 |
Product | hypothetical protein |
Protein accession | YP_001534932 |
Protein GI | 159035679 |
COG category | [R] General function prediction only |
COG ID | [COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000127236 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGCCTGATG ACGCTGTGTC GGCCGCGGAT CCGTGCCGGC ACTTGGGGCC CGGCGCGGAC GGGGGAGCCG TGACGCCCGC CGGCGTGGAG GGACTGCCGG CCGGCGCGTC CGGGCCGCAG CTCGCGCGGG CCGTGCTGGA CGCGGCGAAG GCGCGCCGGT CGGTGGCGCA GCCGCAGCGG CGCAGCGTGC GCGGTGGTCC GAGCGGTGGC GGGCGACGGC CACGGGGTTA CTCCGGCCCG GGGCCGGATC CACGCGACCC ACAGCCCCTC GGCGCGGTGT TGGACCGCCT GGTCAAGGCC CGCGGGTGGC AGCAACCGGC GGCCGAGGCG ACGGTCTTCG GCGCCTGGGA ACGGGTGGTC GGCCCGGAGG TGGCCCAGCA CAGCCGACCG GTGAAGCTGG ACAACGGTGA GCTGACCGTG GAGGCGCGCT CGACTGCCTG GGCCACCCAG CTTCGGCTGC TCGCCGGCTC GCTCCTTCAG CAGATCGCCC GCGAGGTGGG CCACAACGTC GTACGTCGGC TGCACATCCA CGGTCCGGCC GCGCCGTCCT GGTCGCGTGG GCCCCGTCGG GTGCGCGGCC GCGGCCCCCG GGACACCTAC GGCTGA
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Protein sequence | MPDDAVSAAD PCRHLGPGAD GGAVTPAGVE GLPAGASGPQ LARAVLDAAK ARRSVAQPQR RSVRGGPSGG GRRPRGYSGP GPDPRDPQPL GAVLDRLVKA RGWQQPAAEA TVFGAWERVV GPEVAQHSRP VKLDNGELTV EARSTAWATQ LRLLAGSLLQ QIAREVGHNV VRRLHIHGPA APSWSRGPRR VRGRGPRDTY G
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