| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_6006 |
|---|
| Symbol | |
|---|
| ID | 5711301 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 373482 |
|---|
| End bp | 374943 |
|---|
| Gene Length | 1462 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | 16SrRNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.504592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AGAGTTTGAT CCTGGCTCAG AACGAACGCT GGCGGCAGGC TTAACACATG CAAGTCGAGC
GAAGACTTCG GTCTTAGCGG CGGACGGGTG AGTAACGCGT GGGAACATAC CCTTTGGTAC
GGAATAGCCC TGGGAAACTG GGAGTAATAC CGTATGTGGC CTTCGGGCGA AAGATTTATC
GCCAAAGGAT TGGCCCGCGT TGGATTAGGT AGTTGGTGGG GTAATGGCCT ACCAAGCCGA
CGATCCATAG CTGGTTTGAG AGGATGATCA GCCACACTGG GACTGAGACA CGGCCCAGAC
TCCTACGGGA GGCAGCAGTG GGGAATCTTA GACAATGGGG GCAACCCTGA TCTAGCCATG
CCGCGTGTGT GATGAAGGCC TTAGGGTCGT AAAGCACTTT CGCCAGGGAT GATAATGACA
GTACCTGGTA AAGAAACCCC GGCTAACTCC GTGCCAGCAG CCGCGGTAAT ACGGAGGGGG
TTAGCGTTGT TCGGAATTAC TGGGCGTAAA GCGCGCGTAG GCGGACCGAT CAGTCAGAGG
TGAAATCCCA GGGCTCAACC CTGGAACTGC CTTTGATACT GTCGGTCTTG AGGTCGAGAG
AGGTGAGTGG AATTCCGAGT GTAGAGGTGA AATTCGTAGA TATTCGGAGG AACACCAGTG
GCGAAGGCGG CTCACTGGCT CGATACTGAC GCTGAGGTGC GAAAGCGTGG GGAGCAAACA
GGATTAGATA CCCTGGTAGT CCACGCCGTA AACGATGAAT GCCAGTCGTC GGGTTGCATG
CAATTCGGTG ACACACCTAA CGGATTAAGC ATTCCGCCTG GGGAGTACGG TCGCAAGATT
AAAACTCAAA GGAATTGACG GGGGCCCGCA CAAGCGGTGG AGCATGTGGT TTAATTCGAA
GCAACGCGCA GAACCTTACC AACCCTTGAC ATACTTGTCG CGGCTTCCGG AGACGGAAGC
CTTCAGTTCG GCTGGACGAG ATACAGGTGC TGCATGGCTG TCGTCAGCTC GTGTCGTGAG
ATGTTCGGTT AAGTCCGGCA ACGAGCGCAA CCCACACCCT TAGTTGCCAG CAGTTCGGCT
GGGCACTCTA GGGGAACTGC CCGTGATAAG CGGGAGGAAG GTGTGGATGA CGTCAAGTCC
TCATGGCCCT TACGGGTTGG GCTACACACG TGCTACAATG GCAGTGACAA TGGGTTAATC
CCCAAAAGCT GTCTCAGTTC GGATTGTCCT CTGCAACTCG AGGGCATGAA GTCGGAATCG
CTAGTAATCG CGTAACAGCA TGACGCGGTG AATACGTTCC CGGGCCTTGT ACACACCGCC
CGTCACACCA TGGGAGTTGG TTCTACCTGA CGGCCGTGCG CTAACCTTCG GGAGGCAGCG
GACCACGGTA GGATCAGCGA CTGGGGTGAA GTCGTAACAA GGTAGCCGTA GGGGAACCTG
CGGCTGGATC ACCTCCTTTC TA
|
|---|
| Protein sequence | |
|---|
| |