Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_5007 |
Symbol | |
ID | 8130632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 928897 |
End bp | 929556 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003422326 |
Protein GI | 284928593 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.26972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAC GGCTGCGCAA CACGGTGCTG GCGATCGGGC TGGTGGCGCT GACCGGGGGG AGCGCCTGGC TGGCGCTGCA GGCCTGCGCG CTCAACCTGC CGTTGCTGCC CAATGCCTGC CCCGGCGCGC GCACGGATGC GGCGCGCGCG TCGCTCATGG CGGCGGAGGC GCGCACCATC GATCTGCGCG AACGGGTGCT CGCCGCGGAG CGGGAGCTGG CCCGCCTGCA ATGCACCGCC GCCGCGCCCG ACCCCTTTCA GCCGCTCGAC CCGGTGGCCT GGTCGCGGGG CGATCTGGGC GCGCTCTATG GCTGTTGGAG CCTCGACAGC ACCTACGCCA CCCGCGATGT GGACACGGAC GAGGTGATCA CCTACCCGAC CTGGCAGATG TGCTTCAACG GGCAAGGCGA CGGCAAGCAG GTCATGCGCG GCAGCGACGG CACCGATTGT ACCGGCCCGG TCACGGCGCG GTTCGGCACG ACCGGACAGC TGCAGGTCAT CGAGGCCGAC AACCTGTCCT GCGGCGATGG CGGCTATATC CACCGGCGCG ACATCGCCTG CACTCTCCAG GCCGCGTCGG GCCTTCAATG CCAGACCCTG CAGCCCGAAA CCGGAGGCGA GGCGGGGATC GGGATGCGCA AGCTGACCCG GCCGCTCTGA
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Protein sequence | MAARLRNTVL AIGLVALTGG SAWLALQACA LNLPLLPNAC PGARTDAARA SLMAAEARTI DLRERVLAAE RELARLQCTA AAPDPFQPLD PVAWSRGDLG ALYGCWSLDS TYATRDVDTD EVITYPTWQM CFNGQGDGKQ VMRGSDGTDC TGPVTARFGT TGQLQVIEAD NLSCGDGGYI HRRDIACTLQ AASGLQCQTL QPETGGEAGI GMRKLTRPL
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