| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_5004 |
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| Symbol | |
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| ID | 5712963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2080128 |
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| End bp | 2081843 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | D-lactate dehydrogenase |
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| Protein accession | YP_003422329 |
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| Protein GI | 284928597 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.915993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.447595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCTG GACGCATGAC CGACGCAGAT CTGATCGAAA CCCTGCGCGG GATCGTCGGG
GCCCGGCACC TGATGACCGA CCCGCGCAAG ACCGAGCGGT TCCGCAAGGG GTTTCGATCG
GGCGAGGGCG AGGCGCTGGC CGTGGTCCAG CCCGGCACCA TCCTGGAGCA GTGGCGCGTC
CTGCAGGCCT GCGTGAAGGC GGACAAGATC GTCATCATGC AGGCGGCCAA TACCGGGCTG
ACCGAGGGGT CGACCCCCAA TGGCGGGTAT GACCGGGACG TGGTGCTGAT CAACACCCGG
CGGATGGACC AGCTGACGGT GCTGGACGGT GGGCGGCAGG TGGTGAGCCT GCCGGGTGCG
ACCCTGTTCG CGTTGGAGAA ACTGCTGGCC CCCCTGGGCC GGCAGCCCCA TTCGGTGATC
GGGTCGTCCT GCATCGGGGC GTCGATCGTC GGCGGGGTGT GCAACAATTC GGGCGGCGCG
CTGATCGAGC GGGGGCCGTC CTATACCGAG CTGTCGCTTT TTGCGCAGAT CACGGCGGAT
GGGCAGCTGG AGCTGGTCAA TCACCTCGGC ATCAACCTCG GCGAGACGCC CGAAGAGATC
CTGACGCGGT TGCAGGAGGG CAGGTTCGCC GACGCAGATG TGGAGTATTC CAACAAGCAG
GCCTCGGATA CCGAATACGC CACCCGCGTG CGCGATGTGG AGGCCGACAC GCCCGCCCGG
TTCAACGCCG ACAAGCGGCG GCTTTACGAG GCGGCGGGAT GCGCGGGCAA GCTGGCGGTG
TTCGCCGTGC GGCTCGACAC CTACCCCAAG AACGACGCCG AGCAGGTGTT CTATATCGGC
ACGAATGACC CCGATGAACT GACCGAGCTG CGCCGGCACA TGCTGGCGGA GTTCAAATCC
CTACCGGTGT CGGCCGAATA CATGGCCAGA GAGATTTTCG ACATCTCCGA GAAGTACGGG
AAAGACACGG TGATGATGAT CAACTGGCTC GGCACCGACA AGCTGCCGAT GTTCTTTGCC
ATGAAGGGGG CGGTGGATGC GCGGCTGAAC AAGTTCGCGT TGACGCGCGG GTTCACCGAC
AAGTTCATGC AGCTTGCCAG TGCCGTGGTG CCCCGGCTGA TCCCCAAGCG GATGATGGCG
TATCGCGACC GGTTCGAGCA TCACCTGATT CTGAAGATGC GGGACGAGGG GATCGACGAG
GCGCGCGATT TCCTGGGCGC GTTCTTCGCG GGGCGGGGTG GCGATTATTT CGAGTGCACG
GCCAAGGAGG GCAAGATCGC CGGGCTGCAC CGGTTTGCCG CCGCCGGTGC GGCGATCCGG
TACCAAAACA TCCATGCGGA CCAGGTGGAG GATATCCTTG CGCTGGATAT TGCCTTGAAG
CGGAACGAGC GTGCCTGGCT CGAAGAACTG CCGCCGCATA TCGCGGACAA GCTGGTGCAC
AAGCTCTATT ACGGGCACTT CATGTGCCAC GTTCTGCACC AGGATTACAT CGTCAAGAAG
GGCGTCGACG TGAAGGCGCT GAAGGCGGAA ATGCTTGAAT TGCTTGACAA ACGGGGTGCG
GAATACCCCG CCGAGCACAA TGTCGGACAT CTTTATGGAG CCAAACCGGA CCTTGCTGCG
TTCTACAAGA GCGTGGATCC GACGAATTCC ATGAATCCCG GGATCGGGAA GATGTCGAAG
TGCAAGCATT ACGGCGCAAA ACGGGAGGAA GTTTAA
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| Protein sequence | MEAGRMTDAD LIETLRGIVG ARHLMTDPRK TERFRKGFRS GEGEALAVVQ PGTILEQWRV
LQACVKADKI VIMQAANTGL TEGSTPNGGY DRDVVLINTR RMDQLTVLDG GRQVVSLPGA
TLFALEKLLA PLGRQPHSVI GSSCIGASIV GGVCNNSGGA LIERGPSYTE LSLFAQITAD
GQLELVNHLG INLGETPEEI LTRLQEGRFA DADVEYSNKQ ASDTEYATRV RDVEADTPAR
FNADKRRLYE AAGCAGKLAV FAVRLDTYPK NDAEQVFYIG TNDPDELTEL RRHMLAEFKS
LPVSAEYMAR EIFDISEKYG KDTVMMINWL GTDKLPMFFA MKGAVDARLN KFALTRGFTD
KFMQLASAVV PRLIPKRMMA YRDRFEHHLI LKMRDEGIDE ARDFLGAFFA GRGGDYFECT
AKEGKIAGLH RFAAAGAAIR YQNIHADQVE DILALDIALK RNERAWLEEL PPHIADKLVH
KLYYGHFMCH VLHQDYIVKK GVDVKALKAE MLELLDKRGA EYPAEHNVGH LYGAKPDLAA
FYKSVDPTNS MNPGIGKMSK CKHYGAKREE V
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