| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3590 |
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| Symbol | |
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| ID | 5713822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3780019 |
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| End bp | 3781002 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269520 |
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| Product | ubiquinone dependent NADH dehydrogenase |
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| Protein accession | YP_001534924 |
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| Protein GI | 159046130 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.885976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC TCGTGACCAT CTTTGGAGGG TCCGGCTTCG TGGGCCGCTA TATCGCCCGG
CGCATGGCGC AAGAGGGCTG GCGCGTACGC GTCGCGGTTC GCCGCCCGAA CGAGGCCCTG
TTCGTGCGCA CCTATGGCGC CGTGGGGCAG GTGGAACCGA TCCTGAGCAA CATCCGCGAC
GATGCCTCTG TACAGGCCGC GGTGACCGGC GCCGATGTCG TGATCAACTG CGTCGGCATC
CTGTCGGAGA CCGGCAAGAA CACCTTCGGC CTGGTGCAGA GCCACGGTGC TGCCCGGGTC
GCGCGCCTGT CTGCCGAGGC CGGCGTCGGC CGGTTTGTGC AGATCTCCGC TATCGGGGCC
GACCCTGCCG CCAAGAGCGA CTATGCCCGC ACCAAGGCAG AGGGCGAGCA GGCGGTGCTC
CAGGCCATGC CAGAGGCCGT GATCCTGCGC CCCTCCATCG TCTTCGGGCC CGAGGACCAG
TTCTTCAACC GCTTCGCCTC CATGTCGCGC CTCGGACCGA TCCTGCCCGT GGTCGGCGCC
GAGACGAAGT TCCAGCCGGT CTATGTGGAT GACGTGGCCC GCGCAGCGGT GAAGGCGGCT
CTCGGCCAGG CCAAACCCGG CATCTACGAA CTGGGCGGGC CCGACGTGAA CAGCTTCCGC
GAGCTTATGG CGCATATGCT CTCTGTCATC GACCGCCGCC GCCTGATCGT CAACGTCCCC
TTCCCGGTCG CCCATGTGAT GGGCATGACC CTCGACCTGG TGCAGAAGCT CTCGCTGGGG
ATCATCCACA ACGGCATGCT GACCCACGAC CAGGTGCGCA ACCTAGCCAA GGACAACGTG
GTCGCTGCGG ATGCCATGGG GTTCGACGAT CTGGGGATCG AGCCGGTCGC GCTGGAGGCG
GTGCTGCCCG AGTACCTGTG GCGCTTCCGC CCGGCGGGAC AGTACGAAGA GATGAAGAAA
TCCGGCAAGA ACCTGCGGAC CTGA
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| Protein sequence | MSKLVTIFGG SGFVGRYIAR RMAQEGWRVR VAVRRPNEAL FVRTYGAVGQ VEPILSNIRD
DASVQAAVTG ADVVINCVGI LSETGKNTFG LVQSHGAARV ARLSAEAGVG RFVQISAIGA
DPAAKSDYAR TKAEGEQAVL QAMPEAVILR PSIVFGPEDQ FFNRFASMSR LGPILPVVGA
ETKFQPVYVD DVARAAVKAA LGQAKPGIYE LGGPDVNSFR ELMAHMLSVI DRRRLIVNVP
FPVAHVMGMT LDLVQKLSLG IIHNGMLTHD QVRNLAKDNV VAADAMGFDD LGIEPVALEA
VLPEYLWRFR PAGQYEEMKK SGKNLRT
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