| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3588 |
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| Symbol | yrbH |
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| ID | 5713819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3778031 |
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| End bp | 3778993 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269517 |
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| Product | arabinose-5-phosphate isomerase |
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| Protein accession | YP_001534922 |
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| Protein GI | 159046128 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG ACACCTTTCT CGACATCGCC CGCCGGGTCA TCGCGGTGGA GGCCGAGGGC
CTTGCGCAGC TGGCCGCCGG GCTCGACGAC AGTTTCGCCC GCGCGGTCGA TACGATCCTG
AGCGCCAAGG GCCGGGTGAT CGTGTCGGGC ATGGGCAAAT CGGGCCACAT CGCGCGCAAG
ATGGCGGCGA CTTTCGCGTC GACCGGGACG CCTGCGCATT TCGTCCACCC CGCCGAGGCG
AGCCATGGCG ATCTGGGAAT GATGGCGGCG GGCGACGTGG TACTGGTGCT GTCGAACTCA
GGCGAGACGC CGGAGCTCGC GGATCTCGTG GCCTACACGC GGCGGTTCCG CATTCCGTTG
ATCGGGGTGG CGAGCAATCC CGACAGCACG CTGTTGCGCC AGTCCGACGT GGCGCTGGTG
CTGCCGAAGG CGCCGGAGGC CTGCGGGACC GGCATCGTGC CCACCACCTC GACCACCATG
ACCCTGGCCT TGGGCGATGC CCTGGCGGTG GCCCTGATGG AGCATCGCGA GTTCAGCCCC
CAGAATTTCC GCGACTTCCA CCCCGGCGGC AAGCTGGGCG CGCGGCTGTC CAAGGTCGGG
GATCTGATGC ACAGGGGCAC AGAGCTGCCC CTGATCGCCG AAGACGCCGC CATGGGCGAC
GCCCTGCTGG AGATCAGCCA GAAGGGCTTC GGCGTGGTCG GGGTGACCCG GGACGGGCTG
CTGACGGGCG TGATCACCGA CGGGGATTTG CGGCGGCACA TGGACGGGCT GCTGGGGCTC
GCGGCGGGCG ACGTGATGAC CCGCGATCCC CTGACCATCA CCCCCGACGC CCTGGCCGAA
GAAGCCGTGG CGGTGATGAA CGCGCGCAAG ATCACCTGTC TGTTCGTGGT GCCTGAGGAC
GGGCCGAAGG CGCCTGCCGG GTTCCTGCAT ATTCATGACT GTCTGCGGGC CGGGATCGGC
TGA
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| Protein sequence | MSTDTFLDIA RRVIAVEAEG LAQLAAGLDD SFARAVDTIL SAKGRVIVSG MGKSGHIARK
MAATFASTGT PAHFVHPAEA SHGDLGMMAA GDVVLVLSNS GETPELADLV AYTRRFRIPL
IGVASNPDST LLRQSDVALV LPKAPEACGT GIVPTTSTTM TLALGDALAV ALMEHREFSP
QNFRDFHPGG KLGARLSKVG DLMHRGTELP LIAEDAAMGD ALLEISQKGF GVVGVTRDGL
LTGVITDGDL RRHMDGLLGL AAGDVMTRDP LTITPDALAE EAVAVMNARK ITCLFVVPED
GPKAPAGFLH IHDCLRAGIG
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