Gene Dshi_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3581 
Symbol 
ID5713812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3772212 
End bp3773648 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content67% 
IMG OID641269510 
Producthypothetical protein 
Protein accessionYP_001534915 
Protein GI159046121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATC GCTTCGACTA TTTCGTGATC TTCGCCGGGA TGCGCACCGG TTCCAACTAC 
CTGGAGCGGA ACCTCAACGC CGCGCCGGAC TTGCGTTGCT ACGGCGAGCT CTACAACCCC
TATTTCATCG CCCATGAGGG GCAGGAGTCG TTCCTCGGCC TCACCCTCGC GCAGCGCGAG
GCCGACCCGG ACGCCCTGAT CGCGCGCATC CGGGAAGAAA CCGTGGGCCT GCCGGGGTTT
CGGCTGTTTC ACGATCATGA CCAGCGGGTG CGCGACCGGG CACTTGCCGA CCCGCGCGCG
GGCAAGATCA TCCTGACGCG CAATCCACTG GACAGCTATG TCTCCTATTG CCGGGCGCTG
GCGTCGAACC AGTGGGTGCT CACGGACGCC AAGGGCCAGA TCGACACGCC CGCCATCGAT
TTCGACGGGC CGGGATTTGC GACTTTCCTG GCGGATCAGA CCGATTACTT CACCGCCGTG
CGGCAAGGGC TGGCCCGCGC CGGGCAGACC GCGCTGACCC TGCGCTACGA GGATCTGCAG
CAGATCGAGG TGATCAATGG CGCGCTGGCC TATCTGGGCT CGCCTCACCG GCTTGCACGC
CCCGAACGCA CACTGAAACG CCAGAACCCC GAACCGTTGG AGGGGAAGGT GACGGATATG
GCGGTCCTGC GCGCGGCGGT GGCGGGGCTC GACCCGTTCG GGATCGACCA TCTGCCCCCC
TCCGCGCCGC CGCGCGGACC CGCGGTGCCC AGCTATGTCG CCTGTCCCGA CACGGGGCTG
CTCTATCTGC CCATGGCGGG GCCGGAGCCC GACCCGGTGC TGGCCTGGAT GGCCGCGCTG
GACGGGGTGC CCAAGGACGC ACTGATCACG GGTATGCGCC AGAAAGACCT GCGCGCCTGG
CGCCAGGCGC ATCCGAACGC ACGCTGTTTC ACGGTGCTGC GCCATCCCGT CGCCCGCGCC
CACACGGCCT TTGTCACCCG TATCCTGCCC AGCGGATTGC AGGCCTATGC CGAGTTGCGC
CATGGGTTGA TCGCCGCCTA CAAGCTGCCC CTGCCGGAGC ATTTCCCGGC CGACGAGGTG
GACCCGGACC GGATCGGCAA GGCCTTCCTG CGATTTCTGA AGTTTCTCAA GCCCAACCTG
GCGGCCCAGA CCAGCCTGCG GATCGACCCG TCCTGGGCGG CGCAGATGAC GGTGCTGCAG
GGCATGGCCC AGGTCGCGAT GCCGGATGTG ATCCTGCGCG ATGGTCCGAC GCTGCAGACG
GATCTCGCGG GTCTCGCCGC GCGCGCCGGG CGCCCGGCAC CGGACGTGCC GGTGGTTTTC
GAGACTGGCA ATCTCGGCGC GCTATATACA CCGGACATGG AAAAAGCCGC GCAGGCGGCT
TACGGTGTGG ATTACGCCAG TTTCGGGTTC GGCCCCTGGA CGCCGACAAA GGCCTGA
 
Protein sequence
MPDRFDYFVI FAGMRTGSNY LERNLNAAPD LRCYGELYNP YFIAHEGQES FLGLTLAQRE 
ADPDALIARI REETVGLPGF RLFHDHDQRV RDRALADPRA GKIILTRNPL DSYVSYCRAL
ASNQWVLTDA KGQIDTPAID FDGPGFATFL ADQTDYFTAV RQGLARAGQT ALTLRYEDLQ
QIEVINGALA YLGSPHRLAR PERTLKRQNP EPLEGKVTDM AVLRAAVAGL DPFGIDHLPP
SAPPRGPAVP SYVACPDTGL LYLPMAGPEP DPVLAWMAAL DGVPKDALIT GMRQKDLRAW
RQAHPNARCF TVLRHPVARA HTAFVTRILP SGLQAYAELR HGLIAAYKLP LPEHFPADEV
DPDRIGKAFL RFLKFLKPNL AAQTSLRIDP SWAAQMTVLQ GMAQVAMPDV ILRDGPTLQT
DLAGLAARAG RPAPDVPVVF ETGNLGALYT PDMEKAAQAA YGVDYASFGF GPWTPTKA