| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3575 |
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| Symbol | kdsB |
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| ID | 5713806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3765117 |
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| End bp | 3765917 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641269504 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001534909 |
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| Protein GI | 159046115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.790836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTC TGGTGGTCAT CCCGGCGCGG TACCCGTCGG TCCGCTATCC CGGCAAGCCG
CTGGTGGAGT TGCGTGGGGC CACGGGGGTC GCGCGCTCGC TCATCCGGCG CAGCTGGGAC
GCGGCCATGG CCGCCGAGGG CGTGGACCGG GTCGTGGTGG CCACCGATGA CGACCGCATC
CGCAGTCATG CCGAGGGGTT CGGGGCCGAG GCGGTGATGA CCTCAGATAC CTGCCGCAAC
GGGACGGAGC GGTGCGCCGA AGCGCTGACC GCGCTGGGGA TCTCCCCCGA GATCGTCGTC
AATTTGCAGG GCGATGCACC CCTGACCCCG GCGTGGTTCG TGTCGGACCT GGTCGCGGGG
CTGCGCGCGG CCCCGGACGC GGCGCTGGCC ACGCCGGTGC TGCGCTGCGA CGGCGCGGCC
CTGGCCGGGT TTCTGGAGGA TCGCCGCGCG GGCCGGGTGG GCGGGACCAC CGCCGTGTTC
GACCGGGACA ATCACGCGCT CTATTTCTCC AAGGAAGTGA TCCCCTTTAC CAGTGACAGC
TACGCGCCCG ACGCGCCCAC GCCGGTCTTT CACCATGTGG GTCTCTATGC CTACCGCCCC
GATGCGCTGG TCGCGTACGG TACCTGGCCG GTCGGCCCGC TGGAGACCCT CGAAGGGCTG
GAGCAGCTGC GCTTTCTCGA AAACGGCCGC AAGGTGCTCT GCGTCGAGGT GGAGGGTCGC
GGCCGCGCCT TCTGGGAGCT CAACAACCCC GAGGACGTCC CCCGGATCGA GGCGATGCTG
GCCAAGATGG GACAGGCGTG A
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| Protein sequence | MSVLVVIPAR YPSVRYPGKP LVELRGATGV ARSLIRRSWD AAMAAEGVDR VVVATDDDRI
RSHAEGFGAE AVMTSDTCRN GTERCAEALT ALGISPEIVV NLQGDAPLTP AWFVSDLVAG
LRAAPDAALA TPVLRCDGAA LAGFLEDRRA GRVGGTTAVF DRDNHALYFS KEVIPFTSDS
YAPDAPTPVF HHVGLYAYRP DALVAYGTWP VGPLETLEGL EQLRFLENGR KVLCVEVEGR
GRAFWELNNP EDVPRIEAML AKMGQA
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