Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3574 |
Symbol | cysQ |
ID | 5713805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3764320 |
End bp | 3765117 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641269503 |
Product | 3'(2'),5'-bisphosphate nucleotidase |
Protein accession | YP_001534908 |
Protein GI | 159046114 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0645111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCG AGACCGTAAT GCCCGTTTTG CGCCGGCTGT CCCTGGAGGC CGGGGATGCC ATCATGGAGA TCTACACCTC CGACGATTTC GACGTGCGCG CCAAGCCCGA TGACAGCCCC GTCACCGCCG CCGACGAGGC CGCCGATGCG CTGATCTCCG CGGGGCTGAA GGCGGCCTTT CCCGATGTGC TCTGCGTGAC CGAGGAGCAG GCCGCCTCCC ACAGCCAGGC CGCGGACAGC TTCTTCATCG TCGACCCGCT GGACGGTACC AAGGAATTCG TCCATCGCCG CGGCGATTTC ACCGTCAACA TCGCCTATGT GGAAAACGGC ACGCCCGTGC GCGGGGTGGT CTACGCACCT GCCAAGGGGC GGTTGTTCTT CACGCAGGCC GATGGCACCA CGGTCGAAGA GACCGGCGAT TTCGACAAGG ACACCGTCGG GACGGTCAAA CCGCTCTCGG TCGCGACGCC GGACAATAAT GCGCTGATGG TGGTGGCCTC CAAATCCCAC CGGGATCAGG CCACTGACGA CTATATCGGC AAGTACGGGG TCAAGGACAT GACCTCCGCC GGCTCTTCGC TGAAGTTCTG CCTCGTGGCG ACGGGGGAGG CGGATCTCTA TCCGCGCCTC GGCCGCACGA TGGAATGGGA CACCGCCGCT GGTCACGCGG TGCTGCTGGG CGCGGGTGGT CATGTCGTGC GATTCGACGA TCACACGCCG CTGACCTATG GCAAGGCCGA CTATGCCAAC CCGTTCTTCA TCGCCTATGC CCCGGGCGTG GACCTGAAGG CCGCCTGA
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Protein sequence | MDFETVMPVL RRLSLEAGDA IMEIYTSDDF DVRAKPDDSP VTAADEAADA LISAGLKAAF PDVLCVTEEQ AASHSQAADS FFIVDPLDGT KEFVHRRGDF TVNIAYVENG TPVRGVVYAP AKGRLFFTQA DGTTVEETGD FDKDTVGTVK PLSVATPDNN ALMVVASKSH RDQATDDYIG KYGVKDMTSA GSSLKFCLVA TGEADLYPRL GRTMEWDTAA GHAVLLGAGG HVVRFDDHTP LTYGKADYAN PFFIAYAPGV DLKAA
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