Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3569 |
Symbol | radC |
ID | 5713800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3758567 |
End bp | 3759331 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269498 |
Product | DNA repair protein RadC |
Protein accession | YP_001534903 |
Protein GI | 159046109 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCGCG CCCATGCCTT TCACGAATCC CCCCTGCCGC TCTTCGGTGA CGCACGCCCT GTGGCACCCG CCCCCGCGCG GCAGGAGAAA ACCCCATCCT ACCTCAAGGA TCACCGCAAG CGTTTGCGCG AACGCTTCCT CGCGGGCGGG GCGGAGGCGA TGCCGGATTA CGAGTTGCTG GAGCTTGTTC TGTTCCGTGC CATTCCCCGG CAGGATGTCA AACCGCTTGC CCGGCGCCTG ATCGAGGAAT TCGGCGATTT CACCCATGTT CTGGCCGCCC CCCTGCCCCG GCTGCGGGCC GTGGACGGGG TGGGTGAGGC CGTGGCGCTG GAGCTGAAGA TCGTGGAGGC CGCCGCCCAT CGGCTGGCCC GCGGCAAGGT GTTGCAACGC CCCGTGGTCT CGAGCTGGGA CGCCTTGCTG GAATACTGCC AGACCGCCAT GGCCCACCTG GATACGGAAC ACTTCCGGGT GCTGTATCTC GATAACAAGA ACGTGCTGAT CGCGGACGAG GCGCAGGCGC GGGGGACCGT GGATCACGTG CCCGTCTATC CGCGGGAGAT CGCCAAACGC GCGCTGGAGC TGAACGCCTC GGCCCTGATC CTGGTGCACA ACCACCCCTC CGGAGACCCC ACCCCGTCGG AGCAGGACAT CACCATGACC TACGCGATCC GCGACGCGGC CGAGGTGCTC GGCCTGCGGC TCCATGATCA CCTGGTGATC GGCAAGTCGC GGGAGGTCAG TTTCCGCGCG GAGGGCTACC TGTAG
|
Protein sequence | MPRAHAFHES PLPLFGDARP VAPAPARQEK TPSYLKDHRK RLRERFLAGG AEAMPDYELL ELVLFRAIPR QDVKPLARRL IEEFGDFTHV LAAPLPRLRA VDGVGEAVAL ELKIVEAAAH RLARGKVLQR PVVSSWDALL EYCQTAMAHL DTEHFRVLYL DNKNVLIADE AQARGTVDHV PVYPREIAKR ALELNASALI LVHNHPSGDP TPSEQDITMT YAIRDAAEVL GLRLHDHLVI GKSREVSFRA EGYL
|
| |