Gene Dshi_3569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3569 
SymbolradC 
ID5713800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3758567 
End bp3759331 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID641269498 
ProductDNA repair protein RadC 
Protein accessionYP_001534903 
Protein GI159046109 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG CCCATGCCTT TCACGAATCC CCCCTGCCGC TCTTCGGTGA CGCACGCCCT 
GTGGCACCCG CCCCCGCGCG GCAGGAGAAA ACCCCATCCT ACCTCAAGGA TCACCGCAAG
CGTTTGCGCG AACGCTTCCT CGCGGGCGGG GCGGAGGCGA TGCCGGATTA CGAGTTGCTG
GAGCTTGTTC TGTTCCGTGC CATTCCCCGG CAGGATGTCA AACCGCTTGC CCGGCGCCTG
ATCGAGGAAT TCGGCGATTT CACCCATGTT CTGGCCGCCC CCCTGCCCCG GCTGCGGGCC
GTGGACGGGG TGGGTGAGGC CGTGGCGCTG GAGCTGAAGA TCGTGGAGGC CGCCGCCCAT
CGGCTGGCCC GCGGCAAGGT GTTGCAACGC CCCGTGGTCT CGAGCTGGGA CGCCTTGCTG
GAATACTGCC AGACCGCCAT GGCCCACCTG GATACGGAAC ACTTCCGGGT GCTGTATCTC
GATAACAAGA ACGTGCTGAT CGCGGACGAG GCGCAGGCGC GGGGGACCGT GGATCACGTG
CCCGTCTATC CGCGGGAGAT CGCCAAACGC GCGCTGGAGC TGAACGCCTC GGCCCTGATC
CTGGTGCACA ACCACCCCTC CGGAGACCCC ACCCCGTCGG AGCAGGACAT CACCATGACC
TACGCGATCC GCGACGCGGC CGAGGTGCTC GGCCTGCGGC TCCATGATCA CCTGGTGATC
GGCAAGTCGC GGGAGGTCAG TTTCCGCGCG GAGGGCTACC TGTAG
 
Protein sequence
MPRAHAFHES PLPLFGDARP VAPAPARQEK TPSYLKDHRK RLRERFLAGG AEAMPDYELL 
ELVLFRAIPR QDVKPLARRL IEEFGDFTHV LAAPLPRLRA VDGVGEAVAL ELKIVEAAAH
RLARGKVLQR PVVSSWDALL EYCQTAMAHL DTEHFRVLYL DNKNVLIADE AQARGTVDHV
PVYPREIAKR ALELNASALI LVHNHPSGDP TPSEQDITMT YAIRDAAEVL GLRLHDHLVI
GKSREVSFRA EGYL