| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3547 |
|---|
| Symbol | cycA2 |
|---|
| ID | 5713778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3729391 |
|---|
| End bp | 3729831 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641269476 |
|---|
| Product | cytochrome c2 |
|---|
| Protein accession | YP_001534881 |
|---|
| Protein GI | 159046087 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3474] Cytochrome c2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.421654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA CTATCGTAGC CGCCGCCACG TTGATGCTGA CGTCGATGTC CGCACCGGTG
CTCGCCGATG ACCTCGCGGC CACCGGCGAT GCCGCCGAGG GCGAGAAGGC TTTCCGCCAG
TGCCAGTCCT GCCATGTCGT GCAGGATGCC GATGGCAACA CCCTTGCCGG GCGCGCGGCC
AAGACCGGCC CGAACCTTTA CGGCGTTTCC GGCCGCACCG CCGGCTCGGT CGAAGACTTC
CGCTACAGCG ATCTGCTGCT CGCAGCGAAC GAGCAGGGCG TGGTCTATGA CGAGGCCACC
TTCGTCGCCT ATCTGCAGGA CCCGACCGGC TACATGCAGG AAGTCACCGG CACCGGTGAG
CGCGGCAAGA TGAGCTTCCG CGTCCGCAAG GAAGAGGATG CCGTGAACCT GTATGCCTAT
ATCAAGTCGC TCTCCGAGTG A
|
|---|
| Protein sequence | MKLTIVAAAT LMLTSMSAPV LADDLAATGD AAEGEKAFRQ CQSCHVVQDA DGNTLAGRAA
KTGPNLYGVS GRTAGSVEDF RYSDLLLAAN EQGVVYDEAT FVAYLQDPTG YMQEVTGTGE
RGKMSFRVRK EEDAVNLYAY IKSLSE
|
|---|
| |