| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3539 |
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| Symbol | lhaA |
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| ID | 5713770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3722228 |
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| End bp | 3723673 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269468 |
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| Product | PUCC protein |
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| Protein accession | YP_001534873 |
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| Protein GI | 159046079 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCA CCAAGGCCCA GACCAAGCGT CTCGCCAGCC AGTTTCTGCC CTTTGCAGAC
GCGGCCAGCG ACCAGCTGCC CTTGGGCCAG CTGTTGCGCC TGAGCCTGTT CCAGGTCTCG
GTCGGCATGG CCACGGTCAT GCTGCTGGGC ACCCTGAACC GGGTGATGAT CGTGGAACTC
AGCGTGCCGG CCATGCTGGT GGCGCTGATG ATCGCCATCC CGGTCCTCGT CGCCCCCTTC
CGGGCGCTCC TCGGGTTCCG CTCCGACACC CACAAATCCG CCATCGGGTG GAAGCGTGTG
CCCTACATGT GGTTCGGCAC CCTGTGGCAG TTCGGCGGGC TGGCGATCAT GCCGTCCTGC
TTGCTGGTGC TGGGCGGGGA CGTCTATATC GACATCCCCT TCGCCGGCGA GGTGCTGGCG
GCGCTGGCCT TCCTGATGAC GGGGCTGGGG CTGCACATGA CACAGACCGC GGGGCTCGCG
CTCGCCTCGG ACCGGGCCAC GGACGAAACC CGGCCGCGGG TGGTGGCGCT GCTCTACGTG
ATGTTCCTTC TGGGCATGGG CGTCTCGGCC GTGATCATCG GCTGGCTGCT GCGCGATTTC
AGCGGCATTC GCCTGATCCA GGTGGTGCAG GCCACCGCGG GCGCGACCCT GATCCTGAAC
CTGATCGCGC TCTGGAAACA GGAGATCGTC TTCCCGACGA CCGCCGAGGA ACGCGCCGCG
CCGCGCCCCT CCTTCCGCGC GGCCTGGGAC GACTTCGCCG CGGGCGGGCA GGCGGGCCGT
TTGCTGGTCG TGGTGTTCCT CGGCACGCTC GGCTTCAACA TGCAGGACGT CCTGCTGGAA
CCGTACGGCG GCGAGATCCT CGGCCTGTCG GTCTCGGCCA CCACCTTCCT GACCGCGATG
TGGGCGGCGG GCGCGCTGAT CGGCTTTGCT ATGGCCGCGC GCTGGCTCAA GGACGACATC
AACCCGTTCC GGATGTGCGG ACGCGGGCTG CTGATCGGTC TGGCGGCCTT CTCGGCGGTG
ATCTTCGCGG CCCCCATGGG CTCCAACGAG CTGTTCTTCG TCGGGGCGGG CCTGATCGGC
CTCGGCGGCG GGCTCTTCTC CGTCGCGACC CTGACCGCGG CCATGACCAT GCCGGCGGAC
GGGCTGGCCG GGCGCGGCCT GGCGCTGGGC GCCTGGGGCG CGGCACAGGC CACCGCGGTC
GGTGTGGGCG TGGCCCTGGG CGGCACGATC CGCGACGTGG TGAATGCCGC CGTGTCCACC
GGCGCCTGGG GCGAAGCGCT CAACGATCCC TCCACGGGCT ACTCCGTGGT CTACCACCTG
GAGATCGCCC TGATCTTCAT CACCCTCATC GCCCTGGGGC CGCTCGTGCG GGCCCATGCG
CTGACCCGTA ACGACCATGC AACAGGGGAG ACCGGCAAGA TCGGGCTCGC CGATTTCCCG
ACCTGA
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| Protein sequence | MIFTKAQTKR LASQFLPFAD AASDQLPLGQ LLRLSLFQVS VGMATVMLLG TLNRVMIVEL
SVPAMLVALM IAIPVLVAPF RALLGFRSDT HKSAIGWKRV PYMWFGTLWQ FGGLAIMPSC
LLVLGGDVYI DIPFAGEVLA ALAFLMTGLG LHMTQTAGLA LASDRATDET RPRVVALLYV
MFLLGMGVSA VIIGWLLRDF SGIRLIQVVQ ATAGATLILN LIALWKQEIV FPTTAEERAA
PRPSFRAAWD DFAAGGQAGR LLVVVFLGTL GFNMQDVLLE PYGGEILGLS VSATTFLTAM
WAAGALIGFA MAARWLKDDI NPFRMCGRGL LIGLAAFSAV IFAAPMGSNE LFFVGAGLIG
LGGGLFSVAT LTAAMTMPAD GLAGRGLALG AWGAAQATAV GVGVALGGTI RDVVNAAVST
GAWGEALNDP STGYSVVYHL EIALIFITLI ALGPLVRAHA LTRNDHATGE TGKIGLADFP
T
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