Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3536 |
Symbol | bchH |
ID | 5713767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3716986 |
End bp | 3720570 |
Gene Length | 3585 bp |
Protein Length | 1194 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269465 |
Product | magnesium chelatase subunit H |
Protein accession | YP_001534870 |
Protein GI | 159046076 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02025] magnesium chelatase, H subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATA ACTCGACCCT CCCCGGGACC GGCCTCGCGC CGACCCCCTA CCGGTTCGTG ATTATCACGT TGGACAGTCA CGTGCTCGGC CCTGCCGCGC GGGTGAATGC GGCCCTGCAA AAGGACTTCC CGGGCCTGCA GGTCTCGGTC CACGCCACAG GCGAATGGAC GGAAAACCCC GCCGCGCTCG AGGCCACCAA GGCCGCCATC GCCGAGGCCG ATATCGTCGT CGTCAACCTG ATCTTCCTCG ACGACCAGAT CCAGGCGATC CTGCCCGCCC TGCGCGCCCG CCGCGCGGCC TGCGATGCAA TGGTCTGCGT CATCGCCGAC CAGATGCTCG TCAACCTCAC GAAGATGGGC GATGTGGACC TGTCCAAGCC CGCTTCGGGC GCCATGGCGA TCCTCAAGAA ACTCAAGCCC AAGACCAAGA AGACCTCCTC CTCCGAAGGG CAGATGAAGA TCCTGCGCCG CCTGCCCAAG ATCCTGCGGT TCCTGCCGGG CAAGGCCCAG GACCTGCGCA ACTACTTCCT GACCATGCAA TACTGGCTGG ACGGCTCGGA CGAGAACACC GAGGAAATGC TGCGGATGCT GATCTCGGCC TATGCCCGCC GCCCGGGCTG GTCCGAGGTC ACCGCCAAAC CGCCGATCGA ATATCCCGAG GTGGGGCTCT TCCACCCGTC GCATCCGGCC CGCGTCTTCA CCGACCTCGC GGAACTGCCC GGCACCGCCA AGCCGGTCGC CACCATCGGC CTTCTGATGA TGCGCAGCTA CATCCTCAGC CGCGACAGCG CCCATTACGA GGCGGTGATC GACGCATTCG AGGCCCGCGG CGTGCGTGTC ATCCCGGCCT TCGCGGGCGG GCTCGACGGT CGCCCGGCGA TCGAACGGTA TTTCCGCGAC GCCCGCGGGG CCACCGTGGA CGCCATGGTC TCGCTCACCG GCTTCTCCCT CGTGGGCGGC CCGGCCTATA ACGACAGCGC CGCCGCGGTC GAGGTGCTCG AAGACCTCGA CATCCCCTAT ATCGCTGCCC ATCCGCTGGA ATTCCAGACG CTCGGCCAGT GGGCCGCCGC CGCGGGCGGG CTCGGCCCGG TCGAGACCAC CATGCTCATC GCCCTGCCCG AGATCGACGG GGCCACCAAC CCCACGGTCT TCGCGGGCCG CCACGGCGAG GACCGCTGCA CCGGCTGTCA GTACCGCTGC CAGTCCCCGG GCAACACCAA GGCGATGTCC CCCTGCCTCG AACGGATCGA CGTGCTGGCG GAGAAGGCCG TGCGCCTCGC CTCCCTGCGC CGCAAGGAAA ACGCCGCCAA GAAGGTCGCC GTGGTCCTGT TCGGCTTCCC GCCCAATGCC GGCGCTGTCG GAACGGCGGC TTATCTCAGC GTGTTCGAGA GCCTCTTCAA CACCCTCGCC CGGATGAAGG CCGAAGGCTA CGAGGTCGAG GTGCCCGAGA GCGTCGACGC CCTGCGCGCC GCCGTGCTGC AAGGCAACGC CAAGCAATAC GGGCAGGAGG CCAATGTCGC CGCCCATGTC AGCGCCGATC ATATCGTCGC CAATACCCCG CCGCTCGCGG TGATCGAAGA CGTCTGGGGC CCCGCCCCCG GCAAGATCCA GTCCGACGGG CGCGGCGTGT TCATCCTCGG CCAGCATTTC GGCAATGTCT TCGTGGGCGT CCAGCCGACC TTCGGCTACG AGGGCGACCC GATGCGCCTG CTGTTCGAGC GCGGCTTCGC GCCCACCCAC GCCTTCACCC AGTTCTACAT GTGGCTGCGC AACACCTATG CCGCCGACGT GGTGCTGCAT TTCGGCATGC ACGGCGCGCT GGAATTCATG CCGGGCAAGC AGGCGGGCCT CGGTGCGCGC GACTGGCCCG ACCGGCTGAT CGGCGAGATG CCGAATGTCT ATCTCTATGC CTCCAACAAC CCGTCCGAGG CGACCCTGGC CAAGCGCCGG TCCAACGCCG TGACCGTCAC CCATGTGACC CCGCCGCTCG CGACATCGGG TCTCTACAAG GGACTGGCGG AGCTGAAGGA CAGCATGGCG CGCTACCGGG GCCTCGCCCC CGATGCCGAC GAACGCGCCG AGCTTGCCGC CCTGATCGCC CAGCAGGCCG AGGCGGTGGA TATGGACGGC AGCAACCCCG ACACCCTCTG GCTCAAGCTG CTGGAGACCG AGGATGCCCT GATCCCCGAC GGGCTGCATA TCGTGGGCCG CGCGCCCACC GAGGCCGAGA TCGAGGCCCA TCTCGACGTG ATGCCCGACC AGTCGCCCGA GACCCGGGCG CGGGTCGCCG ATCTGCTGAA GCAGGATGGC GAGTTGCAGG GCCTGATGAA GGCACTGTCG GGGCGCTATG TCTCGCCGGT GCCCGGCGGC GACCTGATCC GCTCCCCCGA GGTGCTGCCC GCGGGCCGCA ACATCCACGC GTTCGACCCG TTCCGCATGC CCACCGCTTT TGCCATGCAG GACGGCGCGC GCCAGGCCGA GGTGCTTCTG GAAACCCACG ACACCCTGCC GCGGTCCATC GCGCTGGTGC TCTGGGGTTC CGACAACATC AAATCCGACG GCGGCCCGAT CGCCCAGGCG CTGGCCCTGA TGGGCGCGCG GCCCCGGTTC GACGGCTACG GCCGGCTCTG CGGGGCCGAA CTGATCTCGC TGGCCGAACT TGGCCGCCCG CGCATCGACG TGATCATGAC TCTCTCGGGC ATCTTCCGCG ATCTGCTGCC CCTGCAAACC AAGATGCTGG CCGAAGCCGC GTATCTCTGT GCTGTCGCCG ACGAGCCGGT GGAGCAGAAC TTCGTCCGCG CCCACGCGCT GGCCTATGCC GCCGAGATGG GCTGCGACAT GGAAACCGCC GCTTTGCGGG TCTTTTCCAA CGCCGAAGGG GCCTATGGCT CCAACGTCAA CGCCCTGGTG GACAGCTCCT CCTTCGGCGA AGAGGACGAG CTGGCCGATG CCTACGAGGC GCGCAAGAGC TTCGCCTATG GCCGCTCGGG CAAGGCCTCG GCCAATCCCG AACTGCTGCA AAAGACCCTG CGCGACGTGG ACATCGCCTA CCAGAACCTC GAGTCGGTCG AGCTGGGCGT GACCACGGTG GATCACTATT TCGACACGCT CGGCGGCATC GCCCGCGCGG TCAAGCGCGC CAAGGGCGGG CAGGAGGCGG CCGTCTATAT CGGCGACCAG ACCCGCGGCT CCGCCAAGGT GCGCACCCTC AAGGAACAGG TCGCGCTGGA AACCCGGTCG CGGTCCCTGA ACCCCAAATG GTTCGAAAGC ATGCTCAAGC ACGGCCACGA AGGCGTGCGC CAGATCGAGG CCCAGGTGAC CAACACCATG GGCTGGTCGG CCACCACCGG CCAGGTCGAG CCCTGGGTCT ACCAGCGCCT GAGCGAGACC TTCGTGCTGG ACGACGAGAT GCGCAAACGG CTGGCGGACC TGAACCCCCA GGCCAGCGCG CGCATGGCGA ACCGCCTGAT CGAGGCGTTC GAACGGGACT ACTGGCAGCC GGACGCAGAC ACGCTGGCCG CCCTTCAAGA CGCAGCAGAC GAAATCGAGG ATGCCCTCGA AGGCATCACA ATCGCGGCGG AATGA
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Protein sequence | MLDNSTLPGT GLAPTPYRFV IITLDSHVLG PAARVNAALQ KDFPGLQVSV HATGEWTENP AALEATKAAI AEADIVVVNL IFLDDQIQAI LPALRARRAA CDAMVCVIAD QMLVNLTKMG DVDLSKPASG AMAILKKLKP KTKKTSSSEG QMKILRRLPK ILRFLPGKAQ DLRNYFLTMQ YWLDGSDENT EEMLRMLISA YARRPGWSEV TAKPPIEYPE VGLFHPSHPA RVFTDLAELP GTAKPVATIG LLMMRSYILS RDSAHYEAVI DAFEARGVRV IPAFAGGLDG RPAIERYFRD ARGATVDAMV SLTGFSLVGG PAYNDSAAAV EVLEDLDIPY IAAHPLEFQT LGQWAAAAGG LGPVETTMLI ALPEIDGATN PTVFAGRHGE DRCTGCQYRC QSPGNTKAMS PCLERIDVLA EKAVRLASLR RKENAAKKVA VVLFGFPPNA GAVGTAAYLS VFESLFNTLA RMKAEGYEVE VPESVDALRA AVLQGNAKQY GQEANVAAHV SADHIVANTP PLAVIEDVWG PAPGKIQSDG RGVFILGQHF GNVFVGVQPT FGYEGDPMRL LFERGFAPTH AFTQFYMWLR NTYAADVVLH FGMHGALEFM PGKQAGLGAR DWPDRLIGEM PNVYLYASNN PSEATLAKRR SNAVTVTHVT PPLATSGLYK GLAELKDSMA RYRGLAPDAD ERAELAALIA QQAEAVDMDG SNPDTLWLKL LETEDALIPD GLHIVGRAPT EAEIEAHLDV MPDQSPETRA RVADLLKQDG ELQGLMKALS GRYVSPVPGG DLIRSPEVLP AGRNIHAFDP FRMPTAFAMQ DGARQAEVLL ETHDTLPRSI ALVLWGSDNI KSDGGPIAQA LALMGARPRF DGYGRLCGAE LISLAELGRP RIDVIMTLSG IFRDLLPLQT KMLAEAAYLC AVADEPVEQN FVRAHALAYA AEMGCDMETA ALRVFSNAEG AYGSNVNALV DSSSFGEEDE LADAYEARKS FAYGRSGKAS ANPELLQKTL RDVDIAYQNL ESVELGVTTV DHYFDTLGGI ARAVKRAKGG QEAAVYIGDQ TRGSAKVRTL KEQVALETRS RSLNPKWFES MLKHGHEGVR QIEAQVTNTM GWSATTGQVE PWVYQRLSET FVLDDEMRKR LADLNPQASA RMANRLIEAF ERDYWQPDAD TLAALQDAAD EIEDALEGIT IAAE
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