Gene Dshi_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3536 
SymbolbchH 
ID5713767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3716986 
End bp3720570 
Gene Length3585 bp 
Protein Length1194 aa 
Translation table11 
GC content68% 
IMG OID641269465 
Productmagnesium chelatase subunit H 
Protein accessionYP_001534870 
Protein GI159046076 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases 
TIGRFAM ID[TIGR02025] magnesium chelatase, H subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATA ACTCGACCCT CCCCGGGACC GGCCTCGCGC CGACCCCCTA CCGGTTCGTG 
ATTATCACGT TGGACAGTCA CGTGCTCGGC CCTGCCGCGC GGGTGAATGC GGCCCTGCAA
AAGGACTTCC CGGGCCTGCA GGTCTCGGTC CACGCCACAG GCGAATGGAC GGAAAACCCC
GCCGCGCTCG AGGCCACCAA GGCCGCCATC GCCGAGGCCG ATATCGTCGT CGTCAACCTG
ATCTTCCTCG ACGACCAGAT CCAGGCGATC CTGCCCGCCC TGCGCGCCCG CCGCGCGGCC
TGCGATGCAA TGGTCTGCGT CATCGCCGAC CAGATGCTCG TCAACCTCAC GAAGATGGGC
GATGTGGACC TGTCCAAGCC CGCTTCGGGC GCCATGGCGA TCCTCAAGAA ACTCAAGCCC
AAGACCAAGA AGACCTCCTC CTCCGAAGGG CAGATGAAGA TCCTGCGCCG CCTGCCCAAG
ATCCTGCGGT TCCTGCCGGG CAAGGCCCAG GACCTGCGCA ACTACTTCCT GACCATGCAA
TACTGGCTGG ACGGCTCGGA CGAGAACACC GAGGAAATGC TGCGGATGCT GATCTCGGCC
TATGCCCGCC GCCCGGGCTG GTCCGAGGTC ACCGCCAAAC CGCCGATCGA ATATCCCGAG
GTGGGGCTCT TCCACCCGTC GCATCCGGCC CGCGTCTTCA CCGACCTCGC GGAACTGCCC
GGCACCGCCA AGCCGGTCGC CACCATCGGC CTTCTGATGA TGCGCAGCTA CATCCTCAGC
CGCGACAGCG CCCATTACGA GGCGGTGATC GACGCATTCG AGGCCCGCGG CGTGCGTGTC
ATCCCGGCCT TCGCGGGCGG GCTCGACGGT CGCCCGGCGA TCGAACGGTA TTTCCGCGAC
GCCCGCGGGG CCACCGTGGA CGCCATGGTC TCGCTCACCG GCTTCTCCCT CGTGGGCGGC
CCGGCCTATA ACGACAGCGC CGCCGCGGTC GAGGTGCTCG AAGACCTCGA CATCCCCTAT
ATCGCTGCCC ATCCGCTGGA ATTCCAGACG CTCGGCCAGT GGGCCGCCGC CGCGGGCGGG
CTCGGCCCGG TCGAGACCAC CATGCTCATC GCCCTGCCCG AGATCGACGG GGCCACCAAC
CCCACGGTCT TCGCGGGCCG CCACGGCGAG GACCGCTGCA CCGGCTGTCA GTACCGCTGC
CAGTCCCCGG GCAACACCAA GGCGATGTCC CCCTGCCTCG AACGGATCGA CGTGCTGGCG
GAGAAGGCCG TGCGCCTCGC CTCCCTGCGC CGCAAGGAAA ACGCCGCCAA GAAGGTCGCC
GTGGTCCTGT TCGGCTTCCC GCCCAATGCC GGCGCTGTCG GAACGGCGGC TTATCTCAGC
GTGTTCGAGA GCCTCTTCAA CACCCTCGCC CGGATGAAGG CCGAAGGCTA CGAGGTCGAG
GTGCCCGAGA GCGTCGACGC CCTGCGCGCC GCCGTGCTGC AAGGCAACGC CAAGCAATAC
GGGCAGGAGG CCAATGTCGC CGCCCATGTC AGCGCCGATC ATATCGTCGC CAATACCCCG
CCGCTCGCGG TGATCGAAGA CGTCTGGGGC CCCGCCCCCG GCAAGATCCA GTCCGACGGG
CGCGGCGTGT TCATCCTCGG CCAGCATTTC GGCAATGTCT TCGTGGGCGT CCAGCCGACC
TTCGGCTACG AGGGCGACCC GATGCGCCTG CTGTTCGAGC GCGGCTTCGC GCCCACCCAC
GCCTTCACCC AGTTCTACAT GTGGCTGCGC AACACCTATG CCGCCGACGT GGTGCTGCAT
TTCGGCATGC ACGGCGCGCT GGAATTCATG CCGGGCAAGC AGGCGGGCCT CGGTGCGCGC
GACTGGCCCG ACCGGCTGAT CGGCGAGATG CCGAATGTCT ATCTCTATGC CTCCAACAAC
CCGTCCGAGG CGACCCTGGC CAAGCGCCGG TCCAACGCCG TGACCGTCAC CCATGTGACC
CCGCCGCTCG CGACATCGGG TCTCTACAAG GGACTGGCGG AGCTGAAGGA CAGCATGGCG
CGCTACCGGG GCCTCGCCCC CGATGCCGAC GAACGCGCCG AGCTTGCCGC CCTGATCGCC
CAGCAGGCCG AGGCGGTGGA TATGGACGGC AGCAACCCCG ACACCCTCTG GCTCAAGCTG
CTGGAGACCG AGGATGCCCT GATCCCCGAC GGGCTGCATA TCGTGGGCCG CGCGCCCACC
GAGGCCGAGA TCGAGGCCCA TCTCGACGTG ATGCCCGACC AGTCGCCCGA GACCCGGGCG
CGGGTCGCCG ATCTGCTGAA GCAGGATGGC GAGTTGCAGG GCCTGATGAA GGCACTGTCG
GGGCGCTATG TCTCGCCGGT GCCCGGCGGC GACCTGATCC GCTCCCCCGA GGTGCTGCCC
GCGGGCCGCA ACATCCACGC GTTCGACCCG TTCCGCATGC CCACCGCTTT TGCCATGCAG
GACGGCGCGC GCCAGGCCGA GGTGCTTCTG GAAACCCACG ACACCCTGCC GCGGTCCATC
GCGCTGGTGC TCTGGGGTTC CGACAACATC AAATCCGACG GCGGCCCGAT CGCCCAGGCG
CTGGCCCTGA TGGGCGCGCG GCCCCGGTTC GACGGCTACG GCCGGCTCTG CGGGGCCGAA
CTGATCTCGC TGGCCGAACT TGGCCGCCCG CGCATCGACG TGATCATGAC TCTCTCGGGC
ATCTTCCGCG ATCTGCTGCC CCTGCAAACC AAGATGCTGG CCGAAGCCGC GTATCTCTGT
GCTGTCGCCG ACGAGCCGGT GGAGCAGAAC TTCGTCCGCG CCCACGCGCT GGCCTATGCC
GCCGAGATGG GCTGCGACAT GGAAACCGCC GCTTTGCGGG TCTTTTCCAA CGCCGAAGGG
GCCTATGGCT CCAACGTCAA CGCCCTGGTG GACAGCTCCT CCTTCGGCGA AGAGGACGAG
CTGGCCGATG CCTACGAGGC GCGCAAGAGC TTCGCCTATG GCCGCTCGGG CAAGGCCTCG
GCCAATCCCG AACTGCTGCA AAAGACCCTG CGCGACGTGG ACATCGCCTA CCAGAACCTC
GAGTCGGTCG AGCTGGGCGT GACCACGGTG GATCACTATT TCGACACGCT CGGCGGCATC
GCCCGCGCGG TCAAGCGCGC CAAGGGCGGG CAGGAGGCGG CCGTCTATAT CGGCGACCAG
ACCCGCGGCT CCGCCAAGGT GCGCACCCTC AAGGAACAGG TCGCGCTGGA AACCCGGTCG
CGGTCCCTGA ACCCCAAATG GTTCGAAAGC ATGCTCAAGC ACGGCCACGA AGGCGTGCGC
CAGATCGAGG CCCAGGTGAC CAACACCATG GGCTGGTCGG CCACCACCGG CCAGGTCGAG
CCCTGGGTCT ACCAGCGCCT GAGCGAGACC TTCGTGCTGG ACGACGAGAT GCGCAAACGG
CTGGCGGACC TGAACCCCCA GGCCAGCGCG CGCATGGCGA ACCGCCTGAT CGAGGCGTTC
GAACGGGACT ACTGGCAGCC GGACGCAGAC ACGCTGGCCG CCCTTCAAGA CGCAGCAGAC
GAAATCGAGG ATGCCCTCGA AGGCATCACA ATCGCGGCGG AATGA
 
Protein sequence
MLDNSTLPGT GLAPTPYRFV IITLDSHVLG PAARVNAALQ KDFPGLQVSV HATGEWTENP 
AALEATKAAI AEADIVVVNL IFLDDQIQAI LPALRARRAA CDAMVCVIAD QMLVNLTKMG
DVDLSKPASG AMAILKKLKP KTKKTSSSEG QMKILRRLPK ILRFLPGKAQ DLRNYFLTMQ
YWLDGSDENT EEMLRMLISA YARRPGWSEV TAKPPIEYPE VGLFHPSHPA RVFTDLAELP
GTAKPVATIG LLMMRSYILS RDSAHYEAVI DAFEARGVRV IPAFAGGLDG RPAIERYFRD
ARGATVDAMV SLTGFSLVGG PAYNDSAAAV EVLEDLDIPY IAAHPLEFQT LGQWAAAAGG
LGPVETTMLI ALPEIDGATN PTVFAGRHGE DRCTGCQYRC QSPGNTKAMS PCLERIDVLA
EKAVRLASLR RKENAAKKVA VVLFGFPPNA GAVGTAAYLS VFESLFNTLA RMKAEGYEVE
VPESVDALRA AVLQGNAKQY GQEANVAAHV SADHIVANTP PLAVIEDVWG PAPGKIQSDG
RGVFILGQHF GNVFVGVQPT FGYEGDPMRL LFERGFAPTH AFTQFYMWLR NTYAADVVLH
FGMHGALEFM PGKQAGLGAR DWPDRLIGEM PNVYLYASNN PSEATLAKRR SNAVTVTHVT
PPLATSGLYK GLAELKDSMA RYRGLAPDAD ERAELAALIA QQAEAVDMDG SNPDTLWLKL
LETEDALIPD GLHIVGRAPT EAEIEAHLDV MPDQSPETRA RVADLLKQDG ELQGLMKALS
GRYVSPVPGG DLIRSPEVLP AGRNIHAFDP FRMPTAFAMQ DGARQAEVLL ETHDTLPRSI
ALVLWGSDNI KSDGGPIAQA LALMGARPRF DGYGRLCGAE LISLAELGRP RIDVIMTLSG
IFRDLLPLQT KMLAEAAYLC AVADEPVEQN FVRAHALAYA AEMGCDMETA ALRVFSNAEG
AYGSNVNALV DSSSFGEEDE LADAYEARKS FAYGRSGKAS ANPELLQKTL RDVDIAYQNL
ESVELGVTTV DHYFDTLGGI ARAVKRAKGG QEAAVYIGDQ TRGSAKVRTL KEQVALETRS
RSLNPKWFES MLKHGHEGVR QIEAQVTNTM GWSATTGQVE PWVYQRLSET FVLDDEMRKR
LADLNPQASA RMANRLIEAF ERDYWQPDAD TLAALQDAAD EIEDALEGIT IAAE