| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3516 |
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| Symbol | bchC |
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| ID | 5713747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3695777 |
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| End bp | 3696715 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269445 |
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| Product | 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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| Protein accession | YP_001534850 |
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| Protein GI | 159046056 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.549552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCGA CAGCCGTTGT TCTGACCGGT CCGAAGGCTT TGGGGCTCCA GGACGTGGCG
GTCTCGGACC CCACCGCCAC CGACATCGTG GTGCGAATCG ATCACTCCGG CATCTCCACC
GGCACCGAGA AGCTCTTCTG GTCCGGCAAA ATGCCTCCGT TTCCCGGCTT CTCCTTCCCG
CTCGTGCCCG GCTACGAGGC CGCGGGCGAA GTGGTCGAGG CCGGCGCCGA CACCTCCTAC
AAGCCCGGCG ACCGGGTCTT CGTGCCCGGG GCCAACTGCT ACGGCGACGT GCGCGGCCTG
TTCGGCGGGG CGTCGAACCT GCTGGTGAGC AAGGCCGACC GCGTCGTGCG AATCGACGAG
AGCCTGAAAG CCGAAGGCGC CCTGCTGGCG CTGGCGGCCA CCGCGCGCCA CGCCATGGCG
GGCCTGAACA AATCCGTGCC GGACCTGATC GTGGGTCACG GCGTGCTCGG CCGCCTGCTG
GCGCGCCTGA CCATCGCCGC CGGGGCCCCC GCGCCCACGG TCTGGGAAAT CTCCGAGGAC
CGCGCCAAGG GCGCGACCGG CTACCAGGTC ATCCATCCGG ATGCCGACAC GCGCCGCGAC
TACCGCTCGA TCTACGATGC GTCCGGCAAT GCCGAGCTCA TCTCCAGCCT CATCATGCGG
ATCCAGAAGG GTGGCGAGAT CGTGCTCGCC GGGTTCTACG ACCAGATCAC CTTCCCCTTC
CCCCCCGCCT TCATGAAAGA AGCCCGCCTG CGCATCGCCG CAGAGTGGGA CCGCGATGAT
CTCATCGCAA CCCGCGCCCT GATCGATTCC GGGGCGCTCT CGCTAGAGGA ACTCATCACC
CACACCACTC AGGCCGCCGA CTGCGCGAAC GCATATCAGA CCGCGTTCGA GGATCCGTCC
TGCCTGAAAA TGATCCTGGA TTGGAGCGCG ACCGCATGA
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| Protein sequence | MHATAVVLTG PKALGLQDVA VSDPTATDIV VRIDHSGIST GTEKLFWSGK MPPFPGFSFP
LVPGYEAAGE VVEAGADTSY KPGDRVFVPG ANCYGDVRGL FGGASNLLVS KADRVVRIDE
SLKAEGALLA LAATARHAMA GLNKSVPDLI VGHGVLGRLL ARLTIAAGAP APTVWEISED
RAKGATGYQV IHPDADTRRD YRSIYDASGN AELISSLIMR IQKGGEIVLA GFYDQITFPF
PPAFMKEARL RIAAEWDRDD LIATRALIDS GALSLEELIT HTTQAADCAN AYQTAFEDPS
CLKMILDWSA TA
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